Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1512
         (683 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015A3FAE Cluster: Acetyl-CoA acetyltransferase, mi...    36   0.70 
UniRef50_Q8I3B5 Cluster: Putative uncharacterized protein PFI016...    33   6.5  
UniRef50_Q8IDT3 Cluster: Putative uncharacterized protein PF13_0...    33   8.6  

>UniRef50_UPI00015A3FAE Cluster: Acetyl-CoA acetyltransferase,
           mitochondrial precursor (EC 2.3.1.9) (Acetoacetyl-CoA
           thiolase) (T2).; n=1; Danio rerio|Rep: Acetyl-CoA
           acetyltransferase, mitochondrial precursor (EC 2.3.1.9)
           (Acetoacetyl-CoA thiolase) (T2). - Danio rerio
          Length = 421

 Score = 36.3 bits (80), Expect = 0.70
 Identities = 13/44 (29%), Positives = 28/44 (63%)
 Frame = -3

Query: 180 ICCYVGHRCLTRPTKLIMSISFFDLLLLTKAPEYLIDSGKNESI 49
           I C++   C+T+P+K I +I+ +++   T  P++L++   N+ I
Sbjct: 97  IFCFIDFSCITKPSKQIQNINLYNISECTFPPQHLLNRNNNKVI 140


>UniRef50_Q8I3B5 Cluster: Putative uncharacterized protein PFI0160w;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein PFI0160w - Plasmodium falciparum
            (isolate 3D7)
          Length = 3135

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +3

Query: 351  YKIQFKKNTNTQIF*IFRNYYSFHICFHQHNNEGEIDVYSE 473
            Y  + KK  N  I     NYY +++C H   +EGE + YS+
Sbjct: 2923 YNKKEKKLLNEDIDDALENYYLYNVCTHDIKDEGENEHYSD 2963


>UniRef50_Q8IDT3 Cluster: Putative uncharacterized protein
           PF13_0219; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PF13_0219 - Plasmodium
           falciparum (isolate 3D7)
          Length = 955

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
 Frame = -1

Query: 464 HIYFSFIIMLMKTNMKTIIISENLKNLRVSIFFKLNLIISGIL*V*I*KKKVLKFSLS-- 291
           HI+ +++++L+K   K I I +NL NL     + + ++I  IL   I   K +  +L   
Sbjct: 615 HIHSNYMMLLIKLLTKIIKIYDNLHNL----IYGVTILIISILKSKINHMKYIPINLQLI 670

Query: 290 CKIILNKRHNKLFV-ISRHMIVKMNGLTYYLHRKFVNK 180
             +I    H K ++ +  ++   +NGL  Y H + + K
Sbjct: 671 TLLIRTMEHQKKYIPLFSYISCIINGLKSYKHIRTITK 708


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,377,496
Number of Sequences: 1657284
Number of extensions: 11068860
Number of successful extensions: 20829
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20827
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)