Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1509
         (710 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    23   1.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.5  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.5  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   3.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   4.3  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   5.7  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   5.7  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   5.7  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   5.7  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   7.5  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   7.5  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   7.5  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   7.5  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   7.5  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.9  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    21   9.9  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   9.9  

>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = -2

Query: 319 HKK*NVIPSLMLYNIVGNNELFTSLVLCRSPPGLVPPSCLFLPQN 185
           HK      ++ L N+V N  L  S V C    G   P  L L +N
Sbjct: 24  HKYTTKYDNIDLENVVKNERLLKSYVDCLLEKGRCSPDGLELKKN 68


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 91   TDVVWMSMGDGYHFPSD 41
            T+  W   GDG + PSD
Sbjct: 2328 TNWAWYRQGDGKYLPSD 2344


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 238 CRSPPGLVPPSC 203
           C+ PPG V P C
Sbjct: 284 CKCPPGFVGPRC 295


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/42 (23%), Positives = 20/42 (47%)
 Frame = -2

Query: 643 VQRQSRGQKISRTISNTMDRPHKICLSGSLQNK*LHSLCETP 518
           ++R++       T+    D   +ICL   + N  + + CE+P
Sbjct: 334 IKREASPYASPMTVGKKKDGTVRICLDARMINSKMIADCESP 375


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/34 (23%), Positives = 16/34 (47%)
 Frame = -2

Query: 220 LVPPSCLFLPQNSNTVFRSEGQDSRCNIHKAAHP 119
           +VPP  L      +++   +G   +C + K  +P
Sbjct: 600 MVPPQILPFDFGEDSINEGDGVSVQCTVSKGDYP 633


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 448 EWSWSCISRILQYRCSHDATP 510
           +W+W CI++  + R    A P
Sbjct: 55  QWTWQCINQRCERRHIKGAIP 75


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +3

Query: 99  MRSLSWPGWAALCMLHRLSCPSDRNTV 179
           +R +SW     +   +  +CP  +NTV
Sbjct: 108 LREISWIFLETVANENTTNCPEQKNTV 134


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 93  SLM*FGCLWATVIISHQMSRKL 28
           +L  F  LWATV  S Q++R++
Sbjct: 273 ALFLFFQLWATVYTSSQVTREV 294


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 93  SLM*FGCLWATVIISHQMSRKL 28
           +L  F  LWATV  S Q++R++
Sbjct: 269 ALFLFFQLWATVYTSSQVTREV 290


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 672 NKDSIERVGGSKGKVEGK 619
           +KDSI   GG  GK+  K
Sbjct: 73  DKDSITSDGGKNGKLSDK 90


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 243 FCVEARPGWYHRPVYFCRKTV 181
           F  E R G Y   +YF  KT+
Sbjct: 476 FLQEHRNGMYRPSIYFISKTL 496


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 243 FCVEARPGWYHRPVYFCRKTV 181
           F  E R G Y   +YF  KT+
Sbjct: 476 FLQEHRNGMYRPSIYFISKTL 496


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 672 NKDSIERVGGSKGKVEGK 619
           +KDSI   GG  GK+  K
Sbjct: 21  DKDSITSDGGKNGKLSDK 38


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 672 NKDSIERVGGSKGKVEGK 619
           +KDSI   GG  GK+  K
Sbjct: 204 DKDSITSDGGKNGKLSDK 221


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 642 TPQPAQWSLYLPSDVPQRTLRI 707
           TP+P QW     +   QRT  +
Sbjct: 430 TPKPGQWVPEKSTSTTQRTTTV 451


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 103 APYPGLDGQPY 135
           APYP  D  PY
Sbjct: 12  APYPSTDQNPY 22


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 132 LCMLHRLSCPSDRNTVLLFCGRNR 203
           LC++  LSC  +R  +L   G  R
Sbjct: 226 LCVVSTLSCYLERTELLRSSGETR 249


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,985
Number of Sequences: 336
Number of extensions: 4137
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)