Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1509
         (710 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-948|AAN09184.1| 3313|Drosophila melanogaster CG14438-PB...    33   0.51 
AE014298-947|AAF46197.2| 3313|Drosophila melanogaster CG14438-PA...    33   0.51 
AY089692-1|AAL90430.1|  385|Drosophila melanogaster RH69521p pro...    29   8.2  
AE014134-3035|AAG22440.2|  385|Drosophila melanogaster CG17572-P...    29   8.2  

>AE014298-948|AAN09184.1| 3313|Drosophila melanogaster CG14438-PB,
            isoform B protein.
          Length = 3313

 Score = 32.7 bits (71), Expect = 0.51
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -1

Query: 671  IKTPLSGLGGPKAKSRAKDLADDLQHDGPTS*NMSVW 561
            IKTP+S  G P  K RA D  +D + + PT  N + W
Sbjct: 907  IKTPISSTGNPALKRRADDDVED-KLENPTKKNCAKW 942


>AE014298-947|AAF46197.2| 3313|Drosophila melanogaster CG14438-PA,
            isoform A protein.
          Length = 3313

 Score = 32.7 bits (71), Expect = 0.51
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -1

Query: 671  IKTPLSGLGGPKAKSRAKDLADDLQHDGPTS*NMSVW 561
            IKTP+S  G P  K RA D  +D + + PT  N + W
Sbjct: 907  IKTPISSTGNPALKRRADDDVED-KLENPTKKNCAKW 942


>AY089692-1|AAL90430.1|  385|Drosophila melanogaster RH69521p
           protein.
          Length = 385

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = +1

Query: 109 YPGLDGQPYVCYTGYPVLQTGT-QYYCFAAEIDRTVVPTRA 228
           Y GL   P+V   G+  + TG   Y C  A I R V+ T A
Sbjct: 134 YKGLGSYPFVARIGFKHVNTGAFAYPCAGAVIARRVILTAA 174


>AE014134-3035|AAG22440.2|  385|Drosophila melanogaster CG17572-PA
           protein.
          Length = 385

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = +1

Query: 109 YPGLDGQPYVCYTGYPVLQTGT-QYYCFAAEIDRTVVPTRA 228
           Y GL   P+V   G+  + TG   Y C  A I R V+ T A
Sbjct: 134 YKGLGSYPFVARIGFKHVNTGAFAYPCAGAVIARRVILTAA 174


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,937,488
Number of Sequences: 53049
Number of extensions: 748460
Number of successful extensions: 1940
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1938
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)