Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1508
         (641 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q22U33 Cluster: Potassium cation channel protein; n=1; ...    33   5.9  
UniRef50_A7TQH8 Cluster: Putative uncharacterized protein; n=1; ...    33   5.9  

>UniRef50_Q22U33 Cluster: Potassium cation channel protein; n=1;
           Tetrahymena thermophila SB210|Rep: Potassium cation
           channel protein - Tetrahymena thermophila SB210
          Length = 1069

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 14/31 (45%), Positives = 22/31 (70%)
 Frame = +1

Query: 325 TFRQKANEPVRQTNICST*ELDPQPSAQKSE 417
           TFR+++N  ++Q NI  +  L PQP AQK++
Sbjct: 869 TFRKRSNSEIQQENISISKFLKPQPKAQKAK 899


>UniRef50_A7TQH8 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 830

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +2

Query: 185 LPLFVYLYHSLSLSFTISICPQTKSLCAMGNRHSCILY 298
           +P+ V LY +LS+ F+++IC +TKS  A    +  + Y
Sbjct: 252 IPMTVLLYLTLSIEFSLNICDETKSKIAYTEYYKRLTY 289


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 550,461,817
Number of Sequences: 1657284
Number of extensions: 9646052
Number of successful extensions: 23427
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23396
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48126133708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)