Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1505
         (660 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC16G5.18 |erg24||C-14 sterol reductase Erg24|Schizosaccharomy...    29   0.59 
SPAC32A11.03c |phx1||homeobox transcription factor Phx1|Schizosa...    29   0.78 
SPAC1786.01c ||SPAC31G5.20c|triacylglycerol lipase|Schizosacchar...    28   1.0  
SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein k...    28   1.0  
SPBC18H10.07 |||WW domain-binding protein 4 |Schizosaccharomyces...    28   1.0  
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce...    28   1.4  
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma...    27   1.8  
SPBC21B10.09 |||acetyl-CoA transporter |Schizosaccharomyces pomb...    27   2.4  
SPBPB2B2.18 |||dubious|Schizosaccharomyces pombe|chr 2|||Manual        27   3.2  
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar...    27   3.2  
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb...    26   4.2  
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces...    26   4.2  
SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Ma...    26   4.2  
SPBC16D10.06 |||ZIP zinc transporter 2|Schizosaccharomyces pombe...    26   4.2  
SPAC630.08c |erg25||C-4 methylsterol oxidase|Schizosaccharomyces...    26   5.5  
SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces p...    26   5.5  
SPAC869.03c |||urea transporter |Schizosaccharomyces pombe|chr 1...    26   5.5  
SPBC14C8.15 |||triglyceride lipase-cholesterol esterase |Schizos...    26   5.5  
SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2 |Schiz...    25   7.3  
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces...    25   9.7  

>SPBC16G5.18 |erg24||C-14 sterol reductase Erg24|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 424

 Score = 29.1 bits (62), Expect = 0.59
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
 Frame = -2

Query: 392 YFHL*YFRLLGVHRLQRHSHKRRSFY------YCMAYSWR 291
           YF++ YF +L VHR  R  HK R  Y      YC A  +R
Sbjct: 379 YFYVAYFGVLLVHRNARDDHKCRVKYGEDWEKYCKAVKYR 418


>SPAC32A11.03c |phx1||homeobox transcription factor
           Phx1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 942

 Score = 28.7 bits (61), Expect = 0.78
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = +2

Query: 278 PFTFTSRSRPCNSKMNDVYENVFADDVHRANESITDENRNQNIPSST 418
           P    S S P NSK N+V E   A  V +A E++  E+       ST
Sbjct: 120 PNIVKSESEPANSKQNEVVE---ATSVEKAKENVAHESGTPESGGST 163


>SPAC1786.01c ||SPAC31G5.20c|triacylglycerol
           lipase|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 630

 Score = 28.3 bits (60), Expect = 1.0
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = -3

Query: 409 WYVLIPIFICNTFVCSVYIVCKDILINVVHFTIAW 305
           W ++   F+C TFV  +Y++ + + IN   + I W
Sbjct: 76  WPLMFTAFLCLTFVAFLYLLDR-LYINCYEYFIVW 109


>SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein
           kinase Ppk5 |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 836

 Score = 28.3 bits (60), Expect = 1.0
 Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
 Frame = +2

Query: 347 ADDVHRANESITDENRNQNIPSSTCFLRENHFIVGYQNASTPDLLSSENQHTVSLNISPA 526
           ADD  R    +   N N NI SS+          G+ + ST      +N H   LN SP 
Sbjct: 254 ADDTARMASRMKPSNFNNNIQSSS---------YGHASQSTKLTSQRDNDHQKDLNFSPY 304

Query: 527 LS-PLN 541
            S PLN
Sbjct: 305 KSIPLN 310


>SPBC18H10.07 |||WW domain-binding protein 4 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 224

 Score = 28.3 bits (60), Expect = 1.0
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = +2

Query: 257 Y*YVFRMPFTFTSRSRPCNSKMNDVYENVFADDVHRANESITDENRNQNIPSS 415
           Y  +F     F  RS     K  D  + V  DD+HR+N    +  +N +IP S
Sbjct: 15  YCQIFVKDTPFARRSHEQTYKHQDAIKKVM-DDIHRSNLLRQELEKNLSIPKS 66


>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 681

 Score = 27.9 bits (59), Expect = 1.4
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = +2

Query: 452 YQNASTPDLLSSENQHTVSLNISPALSPLNTSILISDIS 568
           Y N S PDL  S   HT   + S A  PL    L S++S
Sbjct: 22  YDNLSKPDLGGSSELHTYMNDTSLADIPLFEDTLASEVS 60


>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 1000

 Score = 27.5 bits (58), Expect = 1.8
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +2

Query: 470 PDLLSSENQHTVSLNISPALSPLNTSILISDISPFPQPIN 589
           P  + S++   + L I     PL+T+IL++ I   P PIN
Sbjct: 317 PRDIKSKDPRNLLLAIFQQWLPLSTAILLTAIREIPSPIN 356


>SPBC21B10.09 |||acetyl-CoA transporter |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 519

 Score = 27.1 bits (57), Expect = 2.4
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = -3

Query: 463 SILISNYKVIFSKKTSRGWYVLIPIFICNTFVCSVYIVCKDILINVVHFTIAWPTPGG 290
           SIL++   V         + V  PIF+C T   S +   + + + V H  I+ P  GG
Sbjct: 354 SILLNTILVYMVSNWKHRFPVFFPIFLCYTLNAS-FSTIQFVALGVFHSKISDPHIGG 410


>SPBPB2B2.18 |||dubious|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 175

 Score = 26.6 bits (56), Expect = 3.2
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -2

Query: 239 FLITQVNVYA*GDWFYILKLIQNKKIRKYRNKTIYFFLFI 120
           FL  Q+     G W   LK+I+  K+ KY  +   FFLFI
Sbjct: 126 FLCIQIKKLL-GKWESKLKIIKFNKLAKYVYEGNQFFLFI 164


>SPAC9G1.05 |||actin cortical patch component Aip1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 595

 Score = 26.6 bits (56), Expect = 3.2
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +2

Query: 314 SKMNDVYENVFADDVHRANESITDENRNQNIPSSTCFLRENHFIVGYQ 457
           S  N V + + ADD H     + D  R  +I    CF ++N F  GYQ
Sbjct: 356 SHTNQVMQMIMADD-HVITIGMDDTLRVIDIKQG-CFAKDNVFPTGYQ 401


>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 2685

 Score = 26.2 bits (55), Expect = 4.2
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +2

Query: 431 ENHFIVGYQNASTPDLLSS 487
           E + +VGY+N S P+L+SS
Sbjct: 182 ETNNVVGYENPSDPELVSS 200


>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
            pombe|chr 2|||Manual
          Length = 3699

 Score = 26.2 bits (55), Expect = 4.2
 Identities = 20/92 (21%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
 Frame = +2

Query: 272  RMPFTFTSRSRPCNSKMN--DVYENVFADDVHRANESITDENRNQNIPSSTCFLRENHFI 445
            +  F   + S+    +M+  D++++  + +V+     I D      IPS     + N+ +
Sbjct: 2335 KQAFLLATASKDTKIRMDFMDIFDSSMSRNVYSRLTFILDATSWDTIPSIYWIKQANYIL 2394

Query: 446  VGYQNASTPDLLSSENQHTVSLNIS-PALSPL 538
            +G  NA  P  L+  +     + ++ P LS L
Sbjct: 2395 LGAINAKQPVRLTDNSLRFAPVPMTKPILSSL 2426


>SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 358

 Score = 26.2 bits (55), Expect = 4.2
 Identities = 18/62 (29%), Positives = 30/62 (48%)
 Frame = +2

Query: 401 NIPSSTCFLRENHFIVGYQNASTPDLLSSENQHTVSLNISPALSPLNTSILISDISPFPQ 580
           N+ S+T    EN+   G ++ S+  +LS+    T S     A  P ++SIL +   P   
Sbjct: 63  NVASNTS---ENYPYTGSKSLSSSSILSNSTISTSSSTPITASVPTSSSILSNSTIPTTS 119

Query: 581 PI 586
           P+
Sbjct: 120 PV 121


>SPBC16D10.06 |||ZIP zinc transporter 2|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 408

 Score = 26.2 bits (55), Expect = 4.2
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -3

Query: 475 IWCGSILISNYKVIFSKKTSRGWYVLIPIFICN 377
           ++ G + +  +  +FS +  R WY LI +  C+
Sbjct: 362 VYAGLVELLAHDFLFSPERERNWYKLIYLLACS 394


>SPAC630.08c |erg25||C-4 methylsterol oxidase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 300

 Score = 25.8 bits (54), Expect = 5.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 658 HHEVHHQKSVTDFAMAFCW*WQSV 587
           HH+ HH     +F+ +F W W +V
Sbjct: 251 HHDYHHMAFKDNFSSSFRW-WDAV 273


>SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 438

 Score = 25.8 bits (54), Expect = 5.5
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +3

Query: 351 TMYTEQTKVLQMKIGIKTYHPLLVFLEK 434
           T  TEQ +VL+ +     YHPL V   K
Sbjct: 10  TFSTEQIEVLENEYAAHNYHPLPVCFSK 37


>SPAC869.03c |||urea transporter |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 661

 Score = 25.8 bits (54), Expect = 5.5
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -3

Query: 442 KVIFSKKTSRGWYVLIPIFICNTFVCSVYI 353
           K IFSK   RGW ++I I+   T + ++YI
Sbjct: 580 KYIFSKLFFRGWIIVIIIW---TLIAALYI 606


>SPBC14C8.15 |||triglyceride lipase-cholesterol esterase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 460

 Score = 25.8 bits (54), Expect = 5.5
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +1

Query: 439 LYSWIS-KCFHTRFTLVRKSTYRVPKYQPSFKPFKYLYLDIRYITFPTAD*PIAIT 603
           LYS+ S KCF     + R+   ++    P FKP  Y  L+ R   +P  +  + IT
Sbjct: 321 LYSFTSVKCFVHWAQITRRKVLQMYDDSPGFKPSYYTNLN-RIARYPIENIRLPIT 375


>SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 665

 Score = 25.4 bits (53), Expect = 7.3
 Identities = 13/43 (30%), Positives = 17/43 (39%)
 Frame = +2

Query: 359 HRANESITDENRNQNIPSSTCFLRENHFIVGYQNASTPDLLSS 487
           H A     +     N  SS C   E+H +  + N S  DL  S
Sbjct: 10  HHAKSHFHNNACQSNASSSACRASEDHLVSSFPNDSIIDLQPS 52


>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 637

 Score = 25.0 bits (52), Expect = 9.7
 Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
 Frame = +2

Query: 350 DDVHR--ANESITDENRNQNIPSSTCFLRENHFIVGYQNASTPDLL--SSENQHTVSLNI 517
           D++H     +S   E+  Q IPS +  +  +     Y     P L+  +S N H++S + 
Sbjct: 396 DNMHSDVRQDSFNKESIKQRIPSLSPPITRS-----YNAKHRPSLVLGTSVNPHSLSPSQ 450

Query: 518 SPALSPLNTSILISDISPFPQPI 586
            P + P NT+  IS   P   P+
Sbjct: 451 PPVVVPSNTT--ISSSPPLTSPV 471


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,604,151
Number of Sequences: 5004
Number of extensions: 54922
Number of successful extensions: 159
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 159
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 299817502
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)