Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1503
         (620 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   2.1  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    23   2.7  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    23   2.7  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      23   2.7  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      23   2.7  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   4.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.8  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   8.3  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 560 SSPENERPSTVCSEPSPLSAP 498
           +SPE +    V  EP+PL++P
Sbjct: 78  TSPEPDPEIPVAPEPAPLASP 98


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 557 NSTWFTGTQASTTSFGEAAG 616
           N  +F+G   + T FGE+AG
Sbjct: 170 NVKYFSGDPNNVTIFGESAG 189


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 557 NSTWFTGTQASTTSFGEAAG 616
           N  +F+G   + T FGE+AG
Sbjct: 172 NVKYFSGDPNNVTIFGESAG 191


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 557 NSTWFTGTQASTTSFGEAAG 616
           N  +F+G   + T FGE+AG
Sbjct: 170 NVKYFSGDPNNVTIFGESAG 189


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 557 NSTWFTGTQASTTSFGEAAG 616
           N  +F+G   + T FGE+AG
Sbjct: 172 NIKYFSGDPNNVTIFGESAG 191


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/32 (21%), Positives = 15/32 (46%)
 Frame = +1

Query: 370 NHPRSIVNPGYCWRVDENGYDSELKGGPLNND 465
           +HP ++++ GY   +    YD     G +  +
Sbjct: 125 SHPYTVISNGYSSPMSSGSYDPYSPNGKIGRE 156


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 267 LLYPCRRTVFTGISPFVVCHYHF 199
           LL+ C   +FT    F++C Y+F
Sbjct: 266 LLFCCAFIIFTMHLLFLLCIYYF 288



 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 255 CRRTVFTGISPFVVCHYHF 199
           C   +FT    F++C YHF
Sbjct: 151 CAFIIFTVHLLFLLCIYHF 169


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = -1

Query: 245 PFSQVYPHSLSAIITSLMSLTTTRV*VSFEVNVRRVSTECT 123
           P   +  HS  A  T+++SL   +  V  + ++RR   + T
Sbjct: 122 PARTLLEHSFVAFNTNIISLVQNKDYVERDTDIRRFLIKVT 162


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.315    0.132    0.428 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,873
Number of Sequences: 336
Number of extensions: 3293
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)