Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1502
         (499 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18...    26   0.82 
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   1.4  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   7.6  
DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    23   7.6  
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    23   7.6  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   7.6  

>AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18D
           protein.
          Length = 380

 Score = 25.8 bits (54), Expect = 0.82
 Identities = 12/42 (28%), Positives = 25/42 (59%)
 Frame = +3

Query: 144 YYIPSTVGTRSKAQ**IISEQ*CNEHDNLTCRPPCVISSSIN 269
           + IP+ + ++S+     ISE+ CNE+ +LT     + + ++N
Sbjct: 74  FSIPTPLNSQSRGGSERISEKKCNEYKDLTTESVAISALTLN 115


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -2

Query: 159  LRECNIGMYVMFVIYLIC-LFLLTNMF 82
            +RE NI MY+ FV ++I   F   N+F
Sbjct: 1533 IRETNIYMYLYFVFFIIFGSFFTLNLF 1559


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 147  NIGMYVMFVIYLICLFLLTNMF 82
            NI        Y++C FL+ N+F
Sbjct: 1399 NIAFPYFISFYVLCSFLIINLF 1420


>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +1

Query: 346 SSRSDQSEREPTLV*FVVSIRKKKIKMHTQ 435
           SS SD++E E + V  VV  R+KK   + Q
Sbjct: 20  SSESDEAEEESSSV-VVVQDRRKKANPNVQ 48


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +1

Query: 346 SSRSDQSEREPTLV*FVVSIRKKKIKMHTQ 435
           SS SD++E E + V  VV  R+KK   + Q
Sbjct: 20  SSESDEAEEESSSV-VVVQDRRKKANPNVQ 48


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +2

Query: 77  LVNMLVNRNRQMR*ITNITYIPILHSLNC 163
           ++   + R R+   I N  Y P++ + NC
Sbjct: 515 VLESFLQRGREYADIANAYYGPVIENFNC 543


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 462,727
Number of Sequences: 2352
Number of extensions: 9315
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44400195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)