Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1502
(499 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 26 0.25
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 25 0.44
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 25 0.58
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 25 0.58
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 25 0.58
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 25 0.58
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 23 1.3
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 23 1.3
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 23 1.3
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 23 1.3
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 1.3
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 23 1.3
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 2.3
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 22 4.1
AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 22 4.1
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 4.1
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 7.1
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 21 9.4
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 21 9.4
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 21 9.4
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 21 9.4
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 21 9.4
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 21 9.4
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 21 9.4
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 21 9.4
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 21 9.4
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 21 9.4
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 9.4
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 9.4
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 9.4
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 9.4
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 9.4
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 21 9.4
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 25.8 bits (54), Expect = 0.25
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 419 SKCIHNNNNKKMCYANRVRH 478
+K IHNNNN K Y N+ +
Sbjct: 87 NKTIHNNNNYKYNYNNKYNY 106
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.0 bits (52), Expect = 0.44
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 419 SKCIHNNNNKKMCYANRVR 475
+K IHNNNN K Y N +
Sbjct: 87 NKTIHNNNNYKYNYNNNCK 105
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.6 bits (51), Expect = 0.58
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 419 SKCIHNNNNKKMCYAN 466
+K IHNNNN K Y N
Sbjct: 87 NKTIHNNNNYKYNYNN 102
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.6 bits (51), Expect = 0.58
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 419 SKCIHNNNNKKMCYAN 466
+K IHNNNN K Y N
Sbjct: 87 NKTIHNNNNYKYNYNN 102
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.6 bits (51), Expect = 0.58
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 419 SKCIHNNNNKKMCYAN 466
+K IHNNNN K Y N
Sbjct: 87 NKTIHNNNNYKYNYNN 102
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 24.6 bits (51), Expect = 0.58
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 419 SKCIHNNNNKKMCYAN 466
+K IHNNNN K Y N
Sbjct: 320 NKTIHNNNNYKYNYNN 335
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.4 bits (48), Expect = 1.3
Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 2/18 (11%)
Frame = +2
Query: 419 SKCIHNNNN--KKMCYAN 466
+K IHNNNN KK+ Y N
Sbjct: 87 NKTIHNNNNNYKKLQYYN 104
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.4 bits (48), Expect = 1.3
Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 2/18 (11%)
Frame = +2
Query: 419 SKCIHNNNN--KKMCYAN 466
+K IHNNNN KK+ Y N
Sbjct: 87 NKTIHNNNNNYKKLQYYN 104
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 23.4 bits (48), Expect = 1.3
Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 2/18 (11%)
Frame = +2
Query: 419 SKCIHNNNN--KKMCYAN 466
+K IHNNNN KK+ Y N
Sbjct: 87 NKTIHNNNNNYKKLQYYN 104
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.4 bits (48), Expect = 1.3
Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 2/18 (11%)
Frame = +2
Query: 419 SKCIHNNNN--KKMCYAN 466
+K IHNNNN KK+ Y N
Sbjct: 87 NKTIHNNNNNYKKLQYYN 104
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 23.4 bits (48), Expect = 1.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 419 SKCIHNNNNKKMCYAN 466
++ IHNNNN K Y N
Sbjct: 87 NRTIHNNNNYKYNYNN 102
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 23.4 bits (48), Expect = 1.3
Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 2/18 (11%)
Frame = +2
Query: 419 SKCIHNNNN--KKMCYAN 466
+K IHNNNN KK+ Y N
Sbjct: 320 NKTIHNNNNNYKKLQYYN 337
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.6 bits (46), Expect = 2.3
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 386 SDSSCLFVKKKSKCIHNNNNKK 451
S S + +K IHNNNN K
Sbjct: 309 SKESKIISSLSNKTIHNNNNYK 330
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 4.1
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +2
Query: 431 HNNNNKKMCYANRVR 475
+NNNN K Y N R
Sbjct: 91 YNNNNYKKLYCNNYR 105
>AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor
protein.
Length = 139
Score = 21.8 bits (44), Expect = 4.1
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 358 RNAMTSLLCECVCAR 314
R A S++C+C C R
Sbjct: 70 RFAFKSIICKCFCKR 84
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.8 bits (44), Expect = 4.1
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 358 RNAMTSLLCECVCAR 314
R A S++C+C C R
Sbjct: 518 RFAFKSIICKCFCKR 532
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.0 bits (42), Expect = 7.1
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 322 THIRTTVTSSRSDQS 366
T++ TTVTS DQS
Sbjct: 731 TNVATTVTSMSIDQS 745
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.6 bits (41), Expect = 9.4
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2
Query: 431 HNNNNKKMCY 460
+NNN K++CY
Sbjct: 95 NNNNYKQLCY 104
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.6 bits (41), Expect = 9.4
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2
Query: 431 HNNNNKKMCY 460
+NNN K++CY
Sbjct: 95 NNNNYKQLCY 104
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.6 bits (41), Expect = 9.4
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2
Query: 431 HNNNNKKMCY 460
+NNN K++CY
Sbjct: 95 NNNNYKQLCY 104
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.6 bits (41), Expect = 9.4
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2
Query: 431 HNNNNKKMCY 460
+NNN K++CY
Sbjct: 95 NNNNYKQLCY 104
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.6 bits (41), Expect = 9.4
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2
Query: 431 HNNNNKKMCY 460
+NNN K++CY
Sbjct: 95 NNNNYKQLCY 104
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.6 bits (41), Expect = 9.4
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2
Query: 431 HNNNNKKMCY 460
+NNN K++CY
Sbjct: 95 NNNNYKQLCY 104
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 9.4
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +2
Query: 431 HNNNNKKMCYANRVR 475
+NNNN K Y N +
Sbjct: 91 YNNNNYKKLYCNNYK 105
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 9.4
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +2
Query: 431 HNNNNKKMCYANRVR 475
+NNNN K Y N +
Sbjct: 91 YNNNNYKKLYCNNYK 105
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 20.6 bits (41), Expect = 9.4
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 431 HNNNNKKMCYANRV 472
+NN NKK+ Y N +
Sbjct: 97 YNNYNKKLYYKNYI 110
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.4
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 419 SKCIHNNNN 445
+K IHNNNN
Sbjct: 87 NKTIHNNNN 95
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 20.6 bits (41), Expect = 9.4
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 419 SKCIHNNNN 445
+K IHNNNN
Sbjct: 87 NKTIHNNNN 95
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 20.6 bits (41), Expect = 9.4
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +2
Query: 272 QIRLKHLIILNTDISRAHTFAQQ*RHRVPTNQNE 373
+IR K+++ + D+S +T + VP +NE
Sbjct: 184 EIRGKNVVDIGVDLSEFYTSVEWDILEVPAVRNE 217
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 20.6 bits (41), Expect = 9.4
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 431 HNNNNKKMCYANRV 472
+NN NKK+ Y N +
Sbjct: 338 YNNYNKKLYYKNYI 351
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 20.6 bits (41), Expect = 9.4
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 419 SKCIHNNNN 445
+K IHNNNN
Sbjct: 320 NKTIHNNNN 328
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 20.6 bits (41), Expect = 9.4
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 431 HNNNNKKMCYANRV 472
+NN NKK+ Y N +
Sbjct: 333 YNNYNKKLYYKNYI 346
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 20.6 bits (41), Expect = 9.4
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 419 SKCIHNNNN 445
+K IHNNNN
Sbjct: 309 NKTIHNNNN 317
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,221
Number of Sequences: 438
Number of extensions: 2835
Number of successful extensions: 33
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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