BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1497
(668 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF519467-1|ABP73543.1| 165|Anopheles gambiae CTLMA2 protein. 26 1.2
AJ618920-1|CAF01999.1| 204|Anopheles gambiae putative odorant-b... 25 1.6
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 25 2.9
AF000953-1|AAB96576.1| 433|Anopheles gambiae carboxypeptidase A... 25 2.9
AJ439353-7|CAD27929.1| 555|Anopheles gambiae putative glycerol ... 23 6.6
DQ974165-1|ABJ52805.1| 482|Anopheles gambiae serpin 5 protein. 23 8.7
>EF519467-1|ABP73543.1| 165|Anopheles gambiae CTLMA2 protein.
Length = 165
Score = 25.8 bits (54), Expect = 1.2
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +3
Query: 387 MSLPHTSDSTLMQNKYVILCK*FCSCDMFSTLGMTLFSAHCGPYC 521
+S PHT D L QN + CK F + F + T YC
Sbjct: 10 LSGPHTVDDILQQNPCLCPCKPFEEKEYFIPISRTSDWLGAVAYC 54
>AJ618920-1|CAF01999.1| 204|Anopheles gambiae putative
odorant-binding protein OBPjj4 protein.
Length = 204
Score = 25.4 bits (53), Expect = 1.6
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 374 HPGRDVLAAHFGQHVNAEQ 430
HPG+DVL H G + ++
Sbjct: 23 HPGKDVLGCHNGTSITVDE 41
>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
channel alpha1 subunit protein.
Length = 1893
Score = 24.6 bits (51), Expect = 2.9
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -3
Query: 147 EILHKGPNIRTVLWSIIDSW 88
++L +G IRT+LW+ I S+
Sbjct: 1287 KLLARGEGIRTLLWTFIKSF 1306
>AF000953-1|AAB96576.1| 433|Anopheles gambiae carboxypeptidase A
protein.
Length = 433
Score = 24.6 bits (51), Expect = 2.9
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 562 IREAATLNLKKLVEQYGPQWAENNVIPKV 476
+ E A +K L ++YG Q+ NVI +
Sbjct: 335 LNEIAEATVKSLAKRYGTQYKYGNVIDAI 363
>AJ439353-7|CAD27929.1| 555|Anopheles gambiae putative glycerol
kinase protein.
Length = 555
Score = 23.4 bits (48), Expect = 6.6
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -2
Query: 601 ALCMSWLVDHVYAIREA 551
AL ++WL D+V A+R+A
Sbjct: 149 ALKLNWLKDNVVAVRKA 165
>DQ974165-1|ABJ52805.1| 482|Anopheles gambiae serpin 5 protein.
Length = 482
Score = 23.0 bits (47), Expect = 8.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 465 DMFSTLGMTLFSAHCGPYCSTSFFRLRVAA 554
D S L T+F++ C PY S+ + R+ A
Sbjct: 286 DQPSILVPTMFASGCFPYYSSPELQARIMA 315
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 606,423
Number of Sequences: 2352
Number of extensions: 10294
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -