Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1497
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23514-5|AAC46541.2| 590|Caenorhabditis elegans Phosphatase 2a ... 153 1e-37
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 29 2.3
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 29 2.3
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 29 2.3
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr... 29 3.0
U37430-4|AAB52675.1| 1616|Caenorhabditis elegans Vitellogenin st... 29 3.9
AF106589-1|AAC78228.2| 629|Caenorhabditis elegans Abnormal acet... 29 3.9
AF025378-1|AAC14016.2| 629|Caenorhabditis elegans acetylcholine... 29 3.9
U40419-4|AAA81424.3| 1785|Caenorhabditis elegans Novel channel t... 28 5.2
DQ917241-1|ABI94564.1| 1763|Caenorhabditis elegans four domain-t... 28 5.2
AY555272-1|AAS65872.1| 1785|Caenorhabditis elegans four domain-t... 28 5.2
Z81123-4|CAB03367.2| 986|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z54281-8|CAA91051.2| 986|Caenorhabditis elegans Hypothetical pr... 27 9.1
>U23514-5|AAC46541.2| 590|Caenorhabditis elegans Phosphatase 2a
regulatory a subunitprotein 1 protein.
Length = 590
Score = 153 bits (370), Expect = 1e-37
Identities = 65/137 (47%), Positives = 98/137 (71%)
Frame = -2
Query: 598 LCMSWLVDHVYAIREAATLNLKKLVEQYGPQWAENNVIPKVLNMSHEQNYLHRMTYLFCI 419
LC++WL DHV++IREA+TL +K+L +++G QWA N++PK+ + + NYL RMT LFC+
Sbjct: 448 LCLNWLTDHVFSIREASTLIMKELTQKFGGQWASTNIVPKMQKLQKDTNYLQRMTCLFCL 507
Query: 418 NVLSEVCGKDITTRVLLPTVLSMADDNVANVRFNVAKTLQIMAKYLDPAVIQPQVKPVLE 239
N LSE ++ + ++P V + +D+V NVRFN AK+L+ + K L P+ + +VKP+LE
Sbjct: 508 NTLSEAMTQEQILKEIMPIVKDLVEDDVPNVRFNAAKSLKRIGKNLTPSTLTSEVKPLLE 567
Query: 238 KLNVDPDVDVKYFASEA 188
KL D D DV+YF+ EA
Sbjct: 568 KLGKDSDFDVRYFSEEA 584
Score = 36.7 bits (81), Expect = 0.015
Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 4/117 (3%)
Frame = -2
Query: 562 IREAATLNLKKLVEQYGPQWAENNVIPKVLNMSHEQ----NYLHRMTYLFCINVLSEVCG 395
+R AAT L++ +N + +LN++ E N L + I L+ + G
Sbjct: 300 VRCAATQRLQEFALNLPEDKRQNIICNSLLNVAKELVTDGNQLVKSELAGVIMGLAPLIG 359
Query: 394 KDITTRVLLPTVLSMADDNVANVRFNVAKTLQIMAKYLDPAVIQPQVKPVLEKLNVD 224
K+ T LLP + + +D VR N+ +L + + + A + + P + L D
Sbjct: 360 KEQTVSELLPIYMQLLNDQTPEVRLNIISSLDKVNEVIGAAQLSTSLLPAIVGLAED 416
Score = 34.7 bits (76), Expect = 0.060
Identities = 17/90 (18%), Positives = 44/90 (48%)
Frame = -2
Query: 514 GPQWAENNVIPKVLNMSHEQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDNV 335
G + + ++P + + ++Q R+ + ++ ++EV G + LLP ++ +A+D
Sbjct: 359 GKEQTVSELLPIYMQLLNDQTPEVRLNIISSLDKVNEVIGAAQLSTSLLPAIVGLAEDGK 418
Query: 334 ANVRFNVAKTLQIMAKYLDPAVIQPQVKPV 245
VR + + + ++A L ++ P+
Sbjct: 419 WRVRLAIVQFMPLLASQLGQEFFDEKLLPL 448
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -3
Query: 639 QLGQEFFDEKLDQLC 595
QLGQEFFDEKL LC
Sbjct: 435 QLGQEFFDEKLLPLC 449
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 417 TCCPKCAARTSRPGCCCRPCC 355
TCC C +R CCRPCC
Sbjct: 102 TCCRTCCC--TRCCTCCRPCC 120
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/21 (47%), Positives = 11/21 (52%), Gaps = 1/21 (4%)
Frame = -3
Query: 414 CC-PKCAARTSRPGCCCRPCC 355
CC P+C R CCR CC
Sbjct: 88 CCRPRCCCCCRRCCTCCRTCC 108
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 417 TCCPKCAARTSRPGCCCRPCC 355
TCC C +R CCRPCC
Sbjct: 84 TCCRTCCC--TRCCTCCRPCC 102
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = -3
Query: 414 CC-PKCAARTSRPGCCCRPCCLWPTTMLPTC 325
CC P+C RP CCC C T TC
Sbjct: 68 CCRPRCCC-CCRPKCCCTCCRTCCCTRCCTC 97
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 417 TCCPKCAARTSRPGCCCRPCC 355
TCC C +R CCRPCC
Sbjct: 100 TCCRTCCC--TRCCTCCRPCC 118
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/21 (47%), Positives = 11/21 (52%), Gaps = 1/21 (4%)
Frame = -3
Query: 414 CC-PKCAARTSRPGCCCRPCC 355
CC P+C R CCR CC
Sbjct: 86 CCRPRCCCCCRRCCTCCRTCC 106
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 417 TCCPKCAARTSRPGCCCRPCC 355
TCC C +R CCRPCC
Sbjct: 86 TCCRTCCC--TRCCTCCRPCC 104
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = -3
Query: 414 CC-PKCAARTSRPGCCCRPCCLWPTTMLPTC 325
CC P+C RP CCC C T TC
Sbjct: 70 CCRPRCCC-CCRPKCCCTCCRTCCCTRCCTC 99
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 417 TCCPKCAARTSRPGCCCRPCC 355
TCC C +R CCRPCC
Sbjct: 89 TCCRTCCC--TRCCTCCRPCC 107
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = -3
Query: 414 CC-PKCAARTSRPGCCCRPCCLWPTTMLPTC 325
CC P+C RP CCC C T TC
Sbjct: 73 CCRPRCCC-CCRPKCCCTCCRTCCCTRCCTC 102
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 417 TCCPKCAARTSRPGCCCRPCC 355
TCC C +R CCRPCC
Sbjct: 101 TCCRTCCC--TRCCTCCRPCC 119
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/21 (52%), Positives = 11/21 (52%), Gaps = 1/21 (4%)
Frame = -3
Query: 414 CC-PKCAARTSRPGCCCRPCC 355
CC PKC R CCR CC
Sbjct: 87 CCRPKCCCCCRRCCTCCRTCC 107
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 417 TCCPKCAARTSRPGCCCRPCC 355
TCC C +R CCRPCC
Sbjct: 101 TCCRTCCC--TRCCTCCRPCC 119
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/21 (47%), Positives = 11/21 (52%), Gaps = 1/21 (4%)
Frame = -3
Query: 414 CC-PKCAARTSRPGCCCRPCC 355
CC P+C R CCR CC
Sbjct: 87 CCRPRCCCCCRRCCTCCRTCC 107
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 417 TCCPKCAARTSRPGCCCRPCC 355
TCC C +R CCRPCC
Sbjct: 102 TCCRTCCC--TRCCTCCRPCC 120
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/21 (47%), Positives = 11/21 (52%), Gaps = 1/21 (4%)
Frame = -3
Query: 414 CC-PKCAARTSRPGCCCRPCC 355
CC P+C R CCR CC
Sbjct: 88 CCRPRCCCCCRRCCTCCRTCC 108
>Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical protein
F16A11.3b protein.
Length = 1364
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/77 (23%), Positives = 34/77 (44%)
Frame = -2
Query: 505 WAENNVIPKVLNMSHEQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDNVANV 326
W ++ + L M + R + I+ ++ + G++IT LLP + +D +V
Sbjct: 861 WPRLKLVFRKLAMDEQARV--RQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDV 918
Query: 325 RFNVAKTLQIMAKYLDP 275
R + L K+L P
Sbjct: 919 RNGILIHLYDFVKFLSP 935
>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical protein
F16A11.3a protein.
Length = 1490
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/77 (23%), Positives = 34/77 (44%)
Frame = -2
Query: 505 WAENNVIPKVLNMSHEQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDNVANV 326
W ++ + L M + R + I+ ++ + G++IT LLP + +D +V
Sbjct: 987 WPRLKLVFRKLAMDEQARV--RQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDV 1044
Query: 325 RFNVAKTLQIMAKYLDP 275
R + L K+L P
Sbjct: 1045 RNGILIHLYDFVKFLSP 1061
>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical protein
F16A11.3b protein.
Length = 1364
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/77 (23%), Positives = 34/77 (44%)
Frame = -2
Query: 505 WAENNVIPKVLNMSHEQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDNVANV 326
W ++ + L M + R + I+ ++ + G++IT LLP + +D +V
Sbjct: 861 WPRLKLVFRKLAMDEQARV--RQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDV 918
Query: 325 RFNVAKTLQIMAKYLDP 275
R + L K+L P
Sbjct: 919 RNGILIHLYDFVKFLSP 935
>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical protein
F16A11.3a protein.
Length = 1490
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/77 (23%), Positives = 34/77 (44%)
Frame = -2
Query: 505 WAENNVIPKVLNMSHEQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDNVANV 326
W ++ + L M + R + I+ ++ + G++IT LLP + +D +V
Sbjct: 987 WPRLKLVFRKLAMDEQARV--RQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDV 1044
Query: 325 RFNVAKTLQIMAKYLDP 275
R + L K+L P
Sbjct: 1045 RNGILIHLYDFVKFLSP 1061
>U37430-4|AAB52675.1| 1616|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 1 protein.
Length = 1616
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = -2
Query: 577 DHVYAIREAATLNLKKLVEQYGPQW-AENNVIPKVLNMSHEQNYLHRMTYLFCINVLSEV 401
D YAI T ++KL+E+Y + + I ++LN HE H + I
Sbjct: 780 DMDYAILPVDTQLIEKLIEKYISNGKVQFSEIRRLLNQEHEFETHHAAYFYEAIRKFPTT 839
Query: 400 CGKDITTRVLLPTVLS 353
G + +PTV S
Sbjct: 840 LGLPLIVSGKIPTVFS 855
>AF106589-1|AAC78228.2| 629|Caenorhabditis elegans Abnormal
acetylcholinesterase protein2 protein.
Length = 629
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 464 RHVQYFGYDVVLCPLRPVLLHQLLQVEGRSLADGVHVVHQP 586
RH+ Y V C V L + ++E RS+ G HVVH P
Sbjct: 8 RHLTYH----VFCQFALVTLFIVRRIEPRSIVRGDHVVHTP 44
>AF025378-1|AAC14016.2| 629|Caenorhabditis elegans
acetylcholinesterase protein.
Length = 629
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 464 RHVQYFGYDVVLCPLRPVLLHQLLQVEGRSLADGVHVVHQP 586
RH+ Y V C V L + ++E RS+ G HVVH P
Sbjct: 8 RHLTYH----VFCQFALVTLFIVRRIEPRSIVRGDHVVHTP 44
>U40419-4|AAA81424.3| 1785|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 2 protein.
Length = 1785
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 472 NMSHEQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTV 359
N+S EQ+ R T+L C+ V+S +C T LL +
Sbjct: 1274 NVSEEQD---RKTFLLCLTVISAICNILFTLECLLKMI 1308
>DQ917241-1|ABI94564.1| 1763|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1763
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 472 NMSHEQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTV 359
N+S EQ+ R T+L C+ V+S +C T LL +
Sbjct: 1252 NVSEEQD---RKTFLLCLTVISAICNILFTLECLLKMI 1286
>AY555272-1|AAS65872.1| 1785|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1785
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 472 NMSHEQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTV 359
N+S EQ+ R T+L C+ V+S +C T LL +
Sbjct: 1274 NVSEEQD---RKTFLLCLTVISAICNILFTLECLLKMI 1308
>Z81123-4|CAB03367.2| 986|Caenorhabditis elegans Hypothetical
protein F46C5.6 protein.
Length = 986
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -2
Query: 442 RMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDNVANVRFNVAKTL-QIMAKYLDP 275
R+TY+ ++ V K I + L L + D V+N+R K L +I +K + P
Sbjct: 637 RITYIDVAELVLSVFSKRIFIQHFLDDTLRLTSDPVSNIRIRAIKFLPKIKSKLILP 693
>Z54281-8|CAA91051.2| 986|Caenorhabditis elegans Hypothetical
protein F46C5.6 protein.
Length = 986
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -2
Query: 442 RMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDNVANVRFNVAKTL-QIMAKYLDP 275
R+TY+ ++ V K I + L L + D V+N+R K L +I +K + P
Sbjct: 637 RITYIDVAELVLSVFSKRIFIQHFLDDTLRLTSDPVSNIRIRAIKFLPKIKSKLILP 693
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,129,365
Number of Sequences: 27780
Number of extensions: 236944
Number of successful extensions: 899
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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