Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1496
         (650 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IBJ2 Cluster: Putative uncharacterized protein MAL7P1...    35   1.5  
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    33   4.5  

>UniRef50_Q8IBJ2 Cluster: Putative uncharacterized protein MAL7P1.146;
            n=2; Plasmodium|Rep: Putative uncharacterized protein
            MAL7P1.146 - Plasmodium falciparum (isolate 3D7)
          Length = 4894

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 21/44 (47%), Positives = 23/44 (52%)
 Frame = -2

Query: 340  VIFKLFYKAIYF*VIKKHTW*IITFIYLIIFNEIFHNYFFLLLL 209
            V+ K+FYK  YF    K  W   T  Y I  NE   NYFFLL L
Sbjct: 1193 VLIKIFYK--YFNYFIKQNW--KTIFYYIPLNERIENYFFLLPL 1232


>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 14/20 (70%), Positives = 15/20 (75%)
 Frame = -2

Query: 226 FFLLLLADEVMAHLVLSGYW 167
           F LL   DE+ AHLVLSGYW
Sbjct: 154 FLLLRWVDELTAHLVLSGYW 173


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 548,980,769
Number of Sequences: 1657284
Number of extensions: 9760936
Number of successful extensions: 15503
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15500
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)