Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1496
         (650 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011396-1|AAR96188.1|  198|Drosophila melanogaster AT25815p pro...    28   9.6  
AY113225-1|AAM29230.1|  158|Drosophila melanogaster AT09846p pro...    28   9.6  
AE014134-736|AAF51015.3|  158|Drosophila melanogaster CG12677-PA...    28   9.6  

>BT011396-1|AAR96188.1|  198|Drosophila melanogaster AT25815p
           protein.
          Length = 198

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +1

Query: 58  IYLNVCV-CKLYVL*KRRLRFYVSWWMAALTL 150
           IY+ +C  C+L+      + FY +WW + L+L
Sbjct: 97  IYIEICAKCRLFQRLLLFMAFYGAWWFSQLSL 128


>AY113225-1|AAM29230.1|  158|Drosophila melanogaster AT09846p
           protein.
          Length = 158

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +1

Query: 58  IYLNVCV-CKLYVL*KRRLRFYVSWWMAALTL 150
           IY+ +C  C+L+      + FY +WW + L+L
Sbjct: 57  IYIEICAKCRLFQRLLLFMAFYGAWWFSQLSL 88


>AE014134-736|AAF51015.3|  158|Drosophila melanogaster CG12677-PA
           protein.
          Length = 158

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +1

Query: 58  IYLNVCV-CKLYVL*KRRLRFYVSWWMAALTL 150
           IY+ +C  C+L+      + FY +WW + L+L
Sbjct: 57  IYIEICAKCRLFQRLLLFMAFYGAWWFSQLSL 88


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,290,399
Number of Sequences: 53049
Number of extensions: 437670
Number of successful extensions: 759
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)