Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1494
         (604 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X70040-1|CAA49634.1| 1400|Homo sapiens tyrosine kinase protein.        32   1.4  
AK128822-1|BAC87623.1|  555|Homo sapiens protein ( Homo sapiens ...    31   3.1  

>X70040-1|CAA49634.1| 1400|Homo sapiens tyrosine kinase protein.
          Length = 1400

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -1

Query: 400 SCCPNPSSYPQATALAPNDSDRWTPLIRCRSPNRID-FRAVGGP 272
           S CPNP   P   AL+PN S R  PL+   S +R+D F  + GP
Sbjct: 405 SFCPNP---PGLEALSPNTSCRHFPLLVSSSFSRVDLFNGLLGP 445


>AK128822-1|BAC87623.1|  555|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46108 fis, clone TESTI2030519. ).
          Length = 555

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +1

Query: 286 PENRFDLENGNESTESIYQNRSAQELWPEGKMKDSDNKN-RVKECNWSYENEVNVSDEKL 462
           PE +  L    +  E        +++W + KM+D + K    +E  W  E ++   +EK+
Sbjct: 22  PEQKEKLWEHEKMQEQEKMQEQEEKIWEQEKMRDQEEKMWGQEEKMWGQEEKMWGQEEKM 81

Query: 463 REE 471
           RE+
Sbjct: 82  REQ 84


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,867,470
Number of Sequences: 237096
Number of extensions: 1464049
Number of successful extensions: 3192
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3191
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)