Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1493
(616 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 25 0.78
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 24 1.4
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 23 1.8
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 4.1
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 22 5.5
AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. 21 7.2
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 21 9.6
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 9.6
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 9.6
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 9.6
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 9.6
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 21 9.6
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 24.6 bits (51), Expect = 0.78
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 417 ERRRNYPSPGSTGSRPGNSSHR 352
E RRN P PGS G R SHR
Sbjct: 53 EPRRN-PGPGSKGPRDFPRSHR 73
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.8 bits (49), Expect = 1.4
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = -2
Query: 423 PSERRRNYPSP--GSTGSRPGNSSHRNSPR 340
P + N P P G G+RP +RN R
Sbjct: 1016 PQSQEANKPKPATGGKGTRPKRGKYRNYDR 1045
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.8
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = -2
Query: 594 QSRRWYRIPTTSPSLKQRNRSLR---KSPGSRGNNLPISSKRGHSN 466
+++R YR + + RNR+ R K P NN P+S+ ++N
Sbjct: 51 KNKREYRKYRETSKERSRNRTERERSKEPKIISNNNPLSNNYNYNN 96
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.2 bits (45), Expect = 4.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -2
Query: 405 NYPSPGSTGSRPGNSSHRNSPRK*TSLDKEN 313
+YP GS+ P + S S TSL EN
Sbjct: 82 SYPGGGSSSPSPSSPSSFFSSVSPTSLGSEN 112
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 21.8 bits (44), Expect = 5.5
Identities = 8/21 (38%), Positives = 10/21 (47%)
Frame = +3
Query: 336 IFAGYCDANYCRDANLCCPGR 398
+ G C Y + NLC GR
Sbjct: 178 LILGSCKCIYVQSINLCMAGR 198
>AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein.
Length = 147
Score = 21.4 bits (43), Expect = 7.2
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -2
Query: 579 YRIPTTSPSLKQRNRSLRKSPGSRGNNLPISSKRGHSNKACRLG 448
+ + T S+ Q RSL S S + P+SS HS+ G
Sbjct: 47 FGVENTISSVPQPPRSLEGSYDSSSGDSPVSS---HSSNGIHTG 87
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -1
Query: 130 YGNGCLRLVLDINY 89
Y N C +L +INY
Sbjct: 100 YNNNCKKLYYNINY 113
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -1
Query: 130 YGNGCLRLVLDINY 89
Y N C +L +INY
Sbjct: 105 YNNNCKKLYYNINY 118
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -1
Query: 130 YGNGCLRLVLDINY 89
Y N C +L +INY
Sbjct: 105 YNNNCKKLYYNINY 118
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -1
Query: 130 YGNGCLRLVLDINY 89
Y N C +L +INY
Sbjct: 105 YNNNCKKLYYNINY 118
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -1
Query: 130 YGNGCLRLVLDINY 89
Y N C +L +INY
Sbjct: 105 YNNNCKKLYYNINY 118
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 21.0 bits (42), Expect = 9.6
Identities = 5/18 (27%), Positives = 10/18 (55%)
Frame = +2
Query: 563 VVGMRYHLRLWEHGANAV 616
++ H+ W HG+N +
Sbjct: 170 ILNCTIHIASWSHGSNEI 187
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,567
Number of Sequences: 438
Number of extensions: 3366
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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