Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1491
         (360 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC001016-1|AAH01016.1|  172|Homo sapiens NADH dehydrogenase (ubi...    29   3.3  
AL162423-2|CAH73980.1|  172|Homo sapiens NADH dehydrogenase (ubi...    29   3.3  
AF044953-1|AAD42056.1|  172|Homo sapiens NADH:ubiquinone oxidore...    29   3.3  
BC126423-1|AAI26424.1|  210|Homo sapiens keratin associated prot...    29   5.7  
BC126421-1|AAI26422.1|  210|Homo sapiens keratin associated prot...    29   5.7  
AJ406945-1|CAC27584.1|  193|Homo sapiens keratin associated prot...    29   5.7  
AJ406939-1|CAC27578.1|  210|Homo sapiens keratin associated prot...    29   5.7  

>BC001016-1|AAH01016.1|  172|Homo sapiens NADH dehydrogenase
           (ubiquinone) 1 alpha subcomplex, 8, 19kDa protein.
          Length = 172

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = +1

Query: 82  AHAFGRYWNETITKGKGMFYNCNAYKERYEDCCLGKLKRGDSSKDKGLLKALSYITKI 255
           A  F  YW      G+ +F +C   + ++++C L KL  G    D G    LS +TK+
Sbjct: 79  AEPFTEYWTCIDYTGQQLFRHCRKQQAKFDECVLDKL--GWVRPDLG---ELSKVTKV 131


>AL162423-2|CAH73980.1|  172|Homo sapiens NADH dehydrogenase
           (ubiquinone) 1 alpha subcomplex, 8, 19kDa protein.
          Length = 172

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = +1

Query: 82  AHAFGRYWNETITKGKGMFYNCNAYKERYEDCCLGKLKRGDSSKDKGLLKALSYITKI 255
           A  F  YW      G+ +F +C   + ++++C L KL  G    D G    LS +TK+
Sbjct: 79  AEPFTEYWTCIDYTGQQLFRHCRKQQAKFDECVLDKL--GWVRPDLG---ELSKVTKV 131


>AF044953-1|AAD42056.1|  172|Homo sapiens NADH:ubiquinone
           oxidoreductase PGIV subunit protein.
          Length = 172

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = +1

Query: 82  AHAFGRYWNETITKGKGMFYNCNAYKERYEDCCLGKLKRGDSSKDKGLLKALSYITKI 255
           A  F  YW      G+ +F +C   + ++++C L KL  G    D G    LS +TK+
Sbjct: 79  AEPFTEYWTCIDYTGQQLFRHCRKQQAKFDECVLDKL--GWVRPDLG---ELSKVTKV 131


>BC126423-1|AAI26424.1|  210|Homo sapiens keratin associated protein
           4-7 protein.
          Length = 210

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -3

Query: 223 TPCPYYCHRVSVCRGSSPHNALCKRCSCRTCLYL 122
           T C   C   S CR S   ++ C+ C CR C  L
Sbjct: 143 TCCRPSCCISSCCRPSCCESSCCRPCCCRPCCCL 176


>BC126421-1|AAI26422.1|  210|Homo sapiens keratin associated protein
           4-7 protein.
          Length = 210

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -3

Query: 223 TPCPYYCHRVSVCRGSSPHNALCKRCSCRTCLYL 122
           T C   C   S CR S   ++ C+ C CR C  L
Sbjct: 143 TCCRPSCCISSCCRPSCCESSCCRPCCCRPCCCL 176


>AJ406945-1|CAC27584.1|  193|Homo sapiens keratin associated protein
           4.15 protein.
          Length = 193

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -3

Query: 223 TPCPYYCHRVSVCRGSSPHNALCKRCSCRTCLYL 122
           T C   C   S CR S   ++ C+ C CR C  L
Sbjct: 126 TCCRPSCCISSCCRPSCCESSCCRPCCCRPCCCL 159


>AJ406939-1|CAC27578.1|  210|Homo sapiens keratin associated protein
           4.7 protein.
          Length = 210

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -3

Query: 223 TPCPYYCHRVSVCRGSSPHNALCKRCSCRTCLYL 122
           T C   C   S CR S   ++ C+ C CR C  L
Sbjct: 143 TCCRPSCCISSCCRPSCCESSCCRPCCCRPCCCL 176


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,764,629
Number of Sequences: 237096
Number of extensions: 1159102
Number of successful extensions: 2567
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2558
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2190862868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)