Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1486
         (699 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   1.7  
AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase...    25   2.3  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    24   5.3  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   9.2  
AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse t...    23   9.2  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 110  AHGAPTEVLLSTGPSKSSAS 169
            +HG PT  ++S  PS SSAS
Sbjct: 1348 SHGGPTPSIISHTPSLSSAS 1367


>AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase
           subunit 1 protein.
          Length = 688

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 14/35 (40%), Positives = 15/35 (42%)
 Frame = -2

Query: 353 FYGSSRSINGAFRYHKHLSPSSLNPSLATKGSTVN 249
           FY     I+G FR HK L        L   G TVN
Sbjct: 400 FYRWHGMIDGIFRRHKELLTPYTAEQLGNPGVTVN 434


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 2   PHTHTTQKRYNTLYLFFLPMLIALR 76
           P THT      T+++  LP L+ +R
Sbjct: 331 PQTHTMAPWVRTIFINHLPKLLVMR 355


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = +2

Query: 35  TLYLFFLPMLIALRCYISFALK---CR*AHGAPTEVLLSTGPSKS 160
           T Y  FLP + AL  ++ F +K   C   +  P+ +L     SKS
Sbjct: 456 TFYAPFLPAIAALLTFLMFYIKKFACL-VNSNPSAILYRASRSKS 499


>AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -1

Query: 624 CTLYKWLTAFMLKMTY 577
           C+L +WL ++++  TY
Sbjct: 95  CSLVQWLKSYLINRTY 110


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 682,724
Number of Sequences: 2352
Number of extensions: 14060
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)