Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1486
         (699 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y11411-1|CAA72214.1|  700|Homo sapiens pristanoyl-CoA oxidase pr...    34   0.56 
BC017053-1|AAH17053.1|  624|Homo sapiens ACOX3 protein protein.        34   0.56 
BC036837-1|AAH36837.1|  240|Homo sapiens bA299N6.3 protein.            31   5.2  
AL590548-8|CAD11903.2|  240|Homo sapiens novel protein protein.        31   5.2  

>Y11411-1|CAA72214.1|  700|Homo sapiens pristanoyl-CoA oxidase
           protein.
          Length = 700

 Score = 33.9 bits (74), Expect = 0.56
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -1

Query: 615 YKWLTAFMLKMTYEKVERLRSEGRDPLQAKNE 520
           YKWL  ++L+ TY+K+ + +  G    +A+N+
Sbjct: 518 YKWLVCYLLRETYQKLNQEKRSGSSDFEARNK 549


>BC017053-1|AAH17053.1|  624|Homo sapiens ACOX3 protein protein.
          Length = 624

 Score = 33.9 bits (74), Expect = 0.56
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -1

Query: 615 YKWLTAFMLKMTYEKVERLRSEGRDPLQAKNE 520
           YKWL  ++L+ TY+K+ + +  G    +A+N+
Sbjct: 518 YKWLVCYLLRETYQKLNQEKRSGSSDFEARNK 549


>BC036837-1|AAH36837.1|  240|Homo sapiens bA299N6.3 protein.
          Length = 240

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -2

Query: 395 IPDPVDRIDVTLNTFYGSSRSINGAFRYHKHLSPSSLNPSLATKG 261
           IPDP+DR +V  +   G  R   GA     H  P  L+P+   +G
Sbjct: 167 IPDPLDRQEVQTSPGRGGER--GGALPASAHAGPQPLSPAAEARG 209


>AL590548-8|CAD11903.2|  240|Homo sapiens novel protein protein.
          Length = 240

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -2

Query: 395 IPDPVDRIDVTLNTFYGSSRSINGAFRYHKHLSPSSLNPSLATKG 261
           IPDP+DR +V  +   G  R   GA     H  P  L+P+   +G
Sbjct: 167 IPDPLDRQEVQTSPGRGGER--GGALPASAHAGPQPLSPAAEARG 209


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,600,808
Number of Sequences: 237096
Number of extensions: 1862025
Number of successful extensions: 2802
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2802
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)