Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1485
         (634 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81527-4|CAB04274.2|  388|Caenorhabditis elegans Hypothetical pr...    29   3.7  
AF040657-5|AAB95052.1|  317|Caenorhabditis elegans Hypothetical ...    29   3.7  
Z78419-9|CAB01707.1| 1153|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z73907-3|CAA98126.1| 1153|Caenorhabditis elegans Hypothetical pr...    28   4.8  
AL031630-22|CAA20995.2|  454|Caenorhabditis elegans Hypothetical...    28   6.4  
AF039045-8|AAB94199.1|  300|Caenorhabditis elegans Hypothetical ...    28   6.4  
AF039045-7|AAB94207.1|  333|Caenorhabditis elegans Hypothetical ...    28   6.4  

>Z81527-4|CAB04274.2|  388|Caenorhabditis elegans Hypothetical
           protein F35E12.4 protein.
          Length = 388

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
 Frame = +2

Query: 86  LASRVVLSENPLDSPAIGLQKQPLFETNRNLFYKSIEDL-IFKFRYKDAENHLIFALNTT 262
           L S    +   L++  +GL+   L ET   ++  SI ++ +F     D  N+L+++ +TT
Sbjct: 148 LESNKFYTVKALENDQVGLKYGSLPET---IYDHSIYEIFVFDGETIDPSNYLVYSTSTT 204

Query: 263 LKIINL 280
           L ++NL
Sbjct: 205 LTLLNL 210


>AF040657-5|AAB95052.1|  317|Caenorhabditis elegans Hypothetical
           protein T20H9.3 protein.
          Length = 317

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = +3

Query: 414 KLLYFENERNLN*DFLFFGRVCADVNDGFVEV---SHMTRFTNDSN 542
           K L + N R+++   + F R+   + DGF+E+    H  R+ +D N
Sbjct: 11  KQLEYVNRRSVDKTEICFDRIMYQMKDGFIELDMDGHTIRYDDDEN 56


>Z78419-9|CAB01707.1| 1153|Caenorhabditis elegans Hypothetical
           protein F29D11.2 protein.
          Length = 1153

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
 Frame = +2

Query: 101 VLSENPLDSPAIGLQKQPLFETNRNLFY-KSIEDLIFKFR---YKDAENHLIFALNTTLK 268
           V+   P D P +   KQ L     N+FY K + DLI +     YK+  N L    N  ++
Sbjct: 581 VMRHAPTDQPGVDAYKQMLISMLMNVFYQKKVIDLIVQELAQFYKEDPNALFTLFNDRIE 640


>Z73907-3|CAA98126.1| 1153|Caenorhabditis elegans Hypothetical
           protein F29D11.2 protein.
          Length = 1153

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
 Frame = +2

Query: 101 VLSENPLDSPAIGLQKQPLFETNRNLFY-KSIEDLIFKFR---YKDAENHLIFALNTTLK 268
           V+   P D P +   KQ L     N+FY K + DLI +     YK+  N L    N  ++
Sbjct: 581 VMRHAPTDQPGVDAYKQMLISMLMNVFYQKKVIDLIVQELAQFYKEDPNALFTLFNDRIE 640


>AL031630-22|CAA20995.2|  454|Caenorhabditis elegans Hypothetical
           protein Y38H6C.17 protein.
          Length = 454

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +3

Query: 543 ELVYSLWMFMIGQPPPFLARLILYSLVMP 629
           E +  +W F+ G PPPF   +++    +P
Sbjct: 151 EHIIEIWQFIAGSPPPFSKIVLILMYFVP 179


>AF039045-8|AAB94199.1|  300|Caenorhabditis elegans Hypothetical
           protein F15E11.2 protein.
          Length = 300

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 156 KGCFCKPMAGLSNGFSLNTTRLAKSCS 76
           KG +C+P + + NG   N+T L   C+
Sbjct: 218 KGKYCEPASAVENGKVCNSTSLTDGCT 244


>AF039045-7|AAB94207.1|  333|Caenorhabditis elegans Hypothetical
           protein F15E11.11 protein.
          Length = 333

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 156 KGCFCKPMAGLSNGFSLNTTRLAKSCS 76
           KG +C+P + + NG   N+T L   C+
Sbjct: 251 KGKYCEPASAVENGKVCNSTSLTDGCT 277


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,949,432
Number of Sequences: 27780
Number of extensions: 279504
Number of successful extensions: 721
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)