Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1485
         (634 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   4.3  
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    21   7.5  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    21   7.5  
AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.           21   7.5  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   9.9  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   9.9  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    21   9.9  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 507 VSHMTRFTNDSNELVYSLWMFMIGQPPPFLA 599
           +SH    + D N  VY +W+  +    P LA
Sbjct: 574 ISHFINHSCDPNLAVYGVWINCLDPNLPKLA 604


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 384 RTSEQRRVWCKLLYFENERN 443
           R    RRV C LL F+ + N
Sbjct: 37  RADRHRRVTCDLLSFKGQVN 56


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 384 RTSEQRRVWCKLLYFENERN 443
           R    RRV C LL F+ + N
Sbjct: 37  RADRHRRVTCDLLSFKGQVN 56


>AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.
          Length = 57

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 384 RTSEQRRVWCKLLYFENERN 443
           R    RRV C LL F+ + N
Sbjct: 12  RADRHRRVTCDLLSFKGQVN 31


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 332 NLTLNKCTNNNV*CFNT 382
           N  LNK T N++ CF T
Sbjct: 551 NSGLNKITRNSLDCFFT 567


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 332 NLTLNKCTNNNV*CFNT 382
           N  LNK T N++ CF T
Sbjct: 551 NSGLNKITRNSLDCFFT 567


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +1

Query: 238 FDFRSKYHPKDYKFNELL 291
           +D++ K+ PK+Y   E+L
Sbjct: 82  YDYKLKWDPKEYGGVEML 99


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,557
Number of Sequences: 438
Number of extensions: 3333
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)