Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1483
         (568 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223300-1|CAA11241.1|  902|Drosophila melanogaster homebox prot...    31   1.4  
BT003305-1|AAO25065.1|  375|Drosophila melanogaster GH10149p pro...    30   2.5  
AE014298-3009|AAF50914.1|  352|Drosophila melanogaster CG1467-PA...    30   2.5  
AY118390-1|AAM48419.1|  873|Drosophila melanogaster RE39020p pro...    29   3.3  
AE013599-3085|AAF46639.3|  873|Drosophila melanogaster CG10052-P...    29   3.3  

>AJ223300-1|CAA11241.1|  902|Drosophila melanogaster homebox protein
           DRx protein.
          Length = 902

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 21/54 (38%), Positives = 25/54 (46%)
 Frame = +2

Query: 365 CDFVDAASDPQDLQCADEASSGDGADPVSDLMDRISTTIGDRWVPRLPYDVCAA 526
           C   D    PQ+L   +  S+GDG D  SDL D  ST+      P    D CAA
Sbjct: 795 CSLPDVCMSPQNLSIGNADSNGDGRDLSSDL-DAGSTSSN----PGSSLDKCAA 843


>BT003305-1|AAO25065.1|  375|Drosophila melanogaster GH10149p
           protein.
          Length = 375

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +3

Query: 303 ELQKPWSRPPAWLDERSAAAYAIS 374
           ELQ  +  PPAWLD+   A Y +S
Sbjct: 71  ELQDDYGTPPAWLDKFEEAQYTMS 94


>AE014298-3009|AAF50914.1|  352|Drosophila melanogaster CG1467-PA
           protein.
          Length = 352

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +3

Query: 303 ELQKPWSRPPAWLDERSAAAYAIS 374
           ELQ  +  PPAWLD+   A Y +S
Sbjct: 48  ELQDDYGTPPAWLDKFEEAQYTMS 71


>AY118390-1|AAM48419.1|  873|Drosophila melanogaster RE39020p
           protein.
          Length = 873

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 21/54 (38%), Positives = 25/54 (46%)
 Frame = +2

Query: 365 CDFVDAASDPQDLQCADEASSGDGADPVSDLMDRISTTIGDRWVPRLPYDVCAA 526
           C   D    PQ+L   +  S+GDG D  SDL D  ST+      P    D CAA
Sbjct: 766 CSGPDVCMSPQNLSIGNADSNGDGRDLSSDL-DAGSTSSN----PGSSLDKCAA 814


>AE013599-3085|AAF46639.3|  873|Drosophila melanogaster CG10052-PA
           protein.
          Length = 873

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 21/54 (38%), Positives = 25/54 (46%)
 Frame = +2

Query: 365 CDFVDAASDPQDLQCADEASSGDGADPVSDLMDRISTTIGDRWVPRLPYDVCAA 526
           C   D    PQ+L   +  S+GDG D  SDL D  ST+      P    D CAA
Sbjct: 766 CSGPDVCMSPQNLSIGNADSNGDGRDLSSDL-DAGSTSSN----PGSSLDKCAA 814


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,045,543
Number of Sequences: 53049
Number of extensions: 403440
Number of successful extensions: 1199
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)