Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1483
         (568 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92833-2|CAB07379.1|  891|Caenorhabditis elegans Hypothetical pr...    28   4.1  
Z83113-1|CAB05543.1|  733|Caenorhabditis elegans Hypothetical pr...    27   7.1  
CU457737-7|CAM36328.1|  130|Caenorhabditis elegans Hypothetical ...    27   7.1  
AF016513-1|AAB69446.1|  733|Caenorhabditis elegans Ce-LEA protein.     27   7.1  
AF016447-16|AAG24016.1|  170|Caenorhabditis elegans Ferritin pro...    27   7.1  
Z82086-5|CAB04992.2|  325|Caenorhabditis elegans Hypothetical pr...    27   9.4  

>Z92833-2|CAB07379.1|  891|Caenorhabditis elegans Hypothetical
           protein F38A6.2 protein.
          Length = 891

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 150 IWNSRTCR*TKLAEATHP 203
           IW+ RTC+ TK A + HP
Sbjct: 526 IWDPRTCKTTKQAHSVHP 543


>Z83113-1|CAB05543.1|  733|Caenorhabditis elegans Hypothetical
           protein K08H10.1 protein.
          Length = 733

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +2

Query: 377 DAASDPQDLQCADEASSGDGADPVSDLMDRISTTIGDR 490
           DA    +D     + S+GD AD   D    I+ TIGD+
Sbjct: 651 DAWDTTKDKASDAKESAGDAADSAKDKSKSITETIGDK 688


>CU457737-7|CAM36328.1|  130|Caenorhabditis elegans Hypothetical
           protein C52D10.11 protein.
          Length = 130

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 15/53 (28%), Positives = 23/53 (43%)
 Frame = +2

Query: 125 IAHIMEDGYMEQQDVSLNEVSRSDAPEAEAGKDFAEYTGYEEGSKRKTAVTTF 283
           + ++++DG   QQ     EV +  +     GK  A      E  KRK+A   F
Sbjct: 55  LQYLLQDGINNQQQAGAQEVQKRKSAFVRFGKRSAPEEEAMEMEKRKSAFVRF 107


>AF016513-1|AAB69446.1|  733|Caenorhabditis elegans Ce-LEA protein.
          Length = 733

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +2

Query: 377 DAASDPQDLQCADEASSGDGADPVSDLMDRISTTIGDR 490
           DA    +D     + S+GD AD   D    I+ TIGD+
Sbjct: 651 DAWDTTKDKASDAKESAGDAADSAKDKSKSITETIGDK 688


>AF016447-16|AAG24016.1|  170|Caenorhabditis elegans Ferritin
           protein 1 protein.
          Length = 170

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
 Frame = +2

Query: 110 SEKR*IAHI---MEDGYMEQQDVSLNEVSRSDAPEAEAGKDFAEY 235
           +E+R  AH+   +++ Y+E+Q  S+NE +R  A    AG    EY
Sbjct: 117 AEQRNDAHLTNYIQEKYLEEQVHSINEFARHIANIKRAGPGLGEY 161


>Z82086-5|CAB04992.2|  325|Caenorhabditis elegans Hypothetical
           protein ZK228.5 protein.
          Length = 325

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -1

Query: 265 LPLRTFFITSVFGEVLPSLCFGCVASANFVQRHVLLFHITIFHY 134
           +P R  FI     + LPSLCF  + +  F Q    +  I+ F Y
Sbjct: 177 VPARPDFIVLSIDKTLPSLCFAFMFALIFPQILFFVIRISWFLY 220


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,881,667
Number of Sequences: 27780
Number of extensions: 199162
Number of successful extensions: 569
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 569
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)