Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1482
         (647 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    45   0.002
UniRef50_Q7RS31 Cluster: Synthetic antigen of P.falciparum, puta...    34   3.4  
UniRef50_A5DEF2 Cluster: Predicted protein; n=3; Saccharomycetac...    33   7.9  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 44.8 bits (101), Expect = 0.002
 Identities = 19/21 (90%), Positives = 20/21 (95%)
 Frame = +2

Query: 116 FLLLKWVDELTAPLVLSGYWS 178
           FLLL+WVDELTA LVLSGYWS
Sbjct: 154 FLLLRWVDELTAHLVLSGYWS 174


>UniRef50_Q7RS31 Cluster: Synthetic antigen of P.falciparum,
           putative; n=7; Plasmodium (Vinckeia)|Rep: Synthetic
           antigen of P.falciparum, putative - Plasmodium yoelii
           yoelii
          Length = 722

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 22/65 (33%), Positives = 31/65 (47%)
 Frame = -1

Query: 524 LNPSLHTTDVKKRDVCVLSDYYLEVNVLRPSKSVRNFM*FTLDNILHSRRPQ*SGTSNTI 345
           +N +L+T D  K   C    YYL  N+LR SK +R    +  D   HS +   S  +N +
Sbjct: 347 INKNLYTNDNPKNGNCSNLPYYLNANILR-SKEIRESK-YLADT--HSEKMMNSTNNNDV 402

Query: 344 LNTMT 330
            N  T
Sbjct: 403 FNACT 407


>UniRef50_A5DEF2 Cluster: Predicted protein; n=3;
           Saccharomycetaceae|Rep: Predicted protein - Pichia
           guilliermondii (Yeast) (Candida guilliermondii)
          Length = 201

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +1

Query: 265 TKYTKIHNHLAKTGC-NWYLGNYVIVLRIVFDVPLHWGLRECKML 396
           T  TKI   +A TGC ++Y  N VI +RI F + L + ++  K++
Sbjct: 50  TTITKISQVVAATGCKHFYYKNLVIAIRIFFSLTLTFAMQFSKVI 94


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 586,857,630
Number of Sequences: 1657284
Number of extensions: 11249005
Number of successful extensions: 19700
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19699
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)