Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1482
         (647 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    25   0.71 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    25   0.71 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   6.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   6.6  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   8.7  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   8.7  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 466 SLNTHTSLFLTSVVCNEG 519
           ++N  T++FL   +CNEG
Sbjct: 269 TVNASTNIFLCDEICNEG 286


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 466 SLNTHTSLFLTSVVCNEG 519
           ++N  T++FL   +CNEG
Sbjct: 269 TVNASTNIFLCDEICNEG 286


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 350 YSTCRFTGAFGNARCCLA 403
           Y TCR  G F + + C A
Sbjct: 557 YGTCRSEGIFSDPKNCAA 574


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 472 NTHTSLFLTSVVCNEGFS 525
           ++H S  LT  VC++ FS
Sbjct: 541 SSHVSAVLTCKVCDQAFS 558


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 117 FYCLNGWTSSQPP 155
           F+C NG   SQPP
Sbjct: 126 FFCHNGDPLSQPP 138


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 117 FYCLNGWTSSQPP 155
           F+C NG   SQPP
Sbjct: 18  FFCHNGDPLSQPP 30


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -3

Query: 288 IMYFSVFCNCLFFVTIH 238
           +++F  FC  LFF+ ++
Sbjct: 9   VLFFFSFCCILFFIYLY 25


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -3

Query: 240 HETLELISQGGWRI 199
           +E +EL  +GGW++
Sbjct: 300 NEIVELQKEGGWKV 313


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,991
Number of Sequences: 336
Number of extensions: 3065
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)