SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1481
         (614 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q03209 Cluster: 61 kDa protein; n=6; Nucleopolyhedrovir...   154   1e-36
UniRef50_P24646 Cluster: Polyhedrin; n=212; root|Rep: Polyhedrin...    68   2e-10
UniRef50_Q91GB9 Cluster: ORF1629; n=2; Epiphyas postvittana NPV|...    54   2e-06
UniRef50_Q2NNS2 Cluster: 1629capsid; n=1; Hyphantria cunea nucle...    48   1e-04
UniRef50_Q6JPH0 Cluster: Polyhedrin, major occlusion body protei...    47   4e-04
UniRef50_Q06KR7 Cluster: Viral capsid associated protein; n=3; N...    46   7e-04
UniRef50_Q1HH95 Cluster: 1629-capsid; n=2; Antheraea pernyi nucl...    41   0.020
UniRef50_A0E9L1 Cluster: Chromosome undetermined scaffold_84, wh...    34   2.3  
UniRef50_UPI0000660009 Cluster: Peptide-N(4)-(N-acetyl-beta-gluc...    33   7.1  
UniRef50_A7TKA1 Cluster: Putative uncharacterized protein; n=1; ...    33   7.1  
UniRef50_Q87RY3 Cluster: Putative uncharacterized protein VP0643...    32   9.4  
UniRef50_Q6MQ74 Cluster: Putative uncharacterized protein precur...    32   9.4  
UniRef50_Q5CQ22 Cluster: WD40 repeat protein; n=2; Cryptosporidi...    32   9.4  
UniRef50_A2EAG5 Cluster: Putative uncharacterized protein; n=1; ...    32   9.4  

>UniRef50_Q03209 Cluster: 61 kDa protein; n=6;
           Nucleopolyhedrovirus|Rep: 61 kDa protein - Autographa
           californica nuclear polyhedrosis virus (AcMNPV)
          Length = 543

 Score =  154 bits (374), Expect = 1e-36
 Identities = 75/80 (93%), Positives = 76/80 (95%)
 Frame = +2

Query: 14  LNDVESLLQNKTQTNIDKARLLLQDLASRVVLSENPLDSPAIGLQKQPLFETNRNLFYKS 193
           LNDVE LLQNKTQTNIDKARLLLQDLAS V LSENPLDSPAIG +KQPLFETNRNLFYKS
Sbjct: 433 LNDVEPLLQNKTQTNIDKARLLLQDLASFVALSENPLDSPAIGSEKQPLFETNRNLFYKS 492

Query: 194 IEDLIFKFRYKDAENHLIFA 253
           IEDLIFKFRYKDAENHLIFA
Sbjct: 493 IEDLIFKFRYKDAENHLIFA 512



 Score = 66.9 bits (156), Expect = 4e-10
 Identities = 30/33 (90%), Positives = 31/33 (93%)
 Frame = +1

Query: 247 FRSTYHPKDYKFNELLKYVQQLSVNQQRTESNA 345
           F  TYHPKDYKFNELLKYVQQLSVNQQRTES+A
Sbjct: 511 FALTYHPKDYKFNELLKYVQQLSVNQQRTESSA 543


>UniRef50_P24646 Cluster: Polyhedrin; n=212; root|Rep: Polyhedrin -
           Spodoptera littoralis nuclear polyhedrosis virus (SlNPV)
          Length = 249

 Score = 68.1 bits (159), Expect = 2e-10
 Identities = 38/78 (48%), Positives = 41/78 (52%)
 Frame = -1

Query: 614 RISLAKKGGGLPNHEHPQRVHQLVRVVCEPRHMGELYKPIVYIGTDXXXXXXXXXXXXXV 435
           RISLAKKGGG P                +       YKPIVY+GTD             V
Sbjct: 172 RISLAKKGGGCPVMNLHAEYTTSFESFIDKVIWYNFYKPIVYVGTDSAEEEEILLEVSLV 231

Query: 434 FKIKEFAPDAPLFTGPAY 381
           FKIKEFAPDAPL+TGPAY
Sbjct: 232 FKIKEFAPDAPLYTGPAY 249


>UniRef50_Q91GB9 Cluster: ORF1629; n=2; Epiphyas postvittana
           NPV|Rep: ORF1629 - Epiphyas postvittana
           nucleopolyhedrovirus (EppoMNPV)
          Length = 562

 Score = 54.4 bits (125), Expect = 2e-06
 Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
 Frame = +2

Query: 14  LNDVESLLQNKTQT--NIDKARLLLQDLASRVVLSENPLDSPAIGLQKQPLFETNRNLFY 187
           L++V SLL  K ++  N+++A+ +L +L  RV L+ N LD+     + Q L+  + N FY
Sbjct: 460 LDNVFSLLDRKPRSVENVNEAKNILDNLKERVKLTSNQLDNA----EAQSLYINDPNQFY 515

Query: 188 KSIEDLIFKFRYKDAENHLIFA 253
             +EDLIF  RY DA+ HL  A
Sbjct: 516 IQVEDLIFAGRYADAKMHLDLA 537


>UniRef50_Q2NNS2 Cluster: 1629capsid; n=1; Hyphantria cunea
           nucleopolyhedrovirus|Rep: 1629capsid - Hyphantria cunea
           nuclear polyhedrosis virus (HcNPV)
          Length = 539

 Score = 48.4 bits (110), Expect = 1e-04
 Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
 Frame = +2

Query: 29  SLLQNKTQT--NIDKARLLLQDLASRVVLSENPLDSPAIGLQKQPLFETNRNLFYKSIED 202
           SLLQ K +T  N++KA + L     RVV+  N LDS     Q   L+  +   FY +IED
Sbjct: 438 SLLQKKPRTIENVEKANVKLNSFRERVVMPANALDSQ----QAPALYAKDAAQFYVAIED 493

Query: 203 LIFKFRYKDAENHL 244
           LI   +Y++A  HL
Sbjct: 494 LILAGKYEEARAHL 507


>UniRef50_Q6JPH0 Cluster: Polyhedrin, major occlusion body protein;
           n=4; Nucleopolyhedrovirus|Rep: Polyhedrin, major
           occlusion body protein - Neodiprion lecontii NPV
          Length = 247

 Score = 46.8 bits (106), Expect = 4e-04
 Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
 Frame = -1

Query: 611 ISLAKKGGGLPNHEHPQRVHQLVRVVCEPRHMG-ELYKPIVYIGTDXXXXXXXXXXXXXV 435
           +SL K+ GG P  +  Q+ ++L       R +    ++PIVYIGTD              
Sbjct: 170 LSLLKRDGGCPMMKIRQQFNELDLEQFVDRILWCHFHRPIVYIGTDSGEEEEVFIEASLT 229

Query: 434 FKIKEFAPDAPLFTGP 387
           F IKEFAP+AP   GP
Sbjct: 230 FIIKEFAPEAPFVNGP 245


>UniRef50_Q06KR7 Cluster: Viral capsid associated protein; n=3;
           Nucleopolyhedrovirus|Rep: Viral capsid associated
           protein - Anticarsia gemmatalis nuclear polyhedrosis
           virus (AgMNPV)
          Length = 643

 Score = 46.0 bits (104), Expect = 7e-04
 Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
 Frame = +2

Query: 14  LNDVESLLQNKTQT--NIDKARLLLQDLASRVVLSENPLDSPAIGLQKQP---LFETNRN 178
           L +V +LL+ K +T  N++KA+  L      VVL EN LD       KQP   L+  + +
Sbjct: 545 LQNVSNLLREKPRTAENVEKAKNSLHLFRKNVVLPENELD-------KQPPLELYAADAS 597

Query: 179 LFYKSIEDLIFKFRYKDA 232
            FY  IEDLIF  RY DA
Sbjct: 598 KFYLQIEDLIFAGRYDDA 615


>UniRef50_Q1HH95 Cluster: 1629-capsid; n=2; Antheraea pernyi
           nucleopolyhedrovirus|Rep: 1629-capsid - Antheraea pernyi
           nuclear polyhedrosis virus (ApNPV)
          Length = 591

 Score = 41.1 bits (92), Expect = 0.020
 Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
 Frame = +2

Query: 14  LNDVESLLQNKTQT--NIDKARLLLQDLASRVVLSENPLDSPAIGLQKQPLFETNRNLFY 187
           L     LL+ + +T  N++KA+  L+  +  V L+EN LDS +       L+  N   FY
Sbjct: 493 LQTASGLLRKRPRTVENVEKAKNDLRLFSKSVQLTENALDSQS----PVELYAANAPQFY 548

Query: 188 KSIEDLIFKFRYKD 229
             IEDLIF  RY D
Sbjct: 549 VQIEDLIFAGRYDD 562


>UniRef50_A0E9L1 Cluster: Chromosome undetermined scaffold_84, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_84,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 362

 Score = 34.3 bits (75), Expect = 2.3
 Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
 Frame = +2

Query: 17  NDVESLLQNKTQTNIDKARLLLQDLASRVVLSENPLDSPAIGLQKQPLFETNRNLF-YKS 193
           ND ES+        I    +L+ D  ++ VLS+  L +  + + K  + E    L  Y+ 
Sbjct: 130 NDFESVFICNVLQKISNLTILINDSVNKKVLSQYELWNNVVFVHKYLIKEQKDFLIEYRK 189

Query: 194 IED--LIFKFRYKDAENHLIFAQHTTLKII 277
           +++   +  F Y+  + HL + QH T K I
Sbjct: 190 LKEHNTLNNFYYQKGQIHLFYEQHETYKQI 219


>UniRef50_UPI0000660009 Cluster:
           Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine
           amidase (EC 3.5.1.52) (PNGase) (hPNGase)
           (Peptide:N-glycanase) (N-glycanase 1).; n=1; Takifugu
           rubripes|Rep:
           Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine
           amidase (EC 3.5.1.52) (PNGase) (hPNGase)
           (Peptide:N-glycanase) (N-glycanase 1). - Takifugu
           rubripes
          Length = 664

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 23/88 (26%), Positives = 45/88 (51%)
 Frame = +2

Query: 23  VESLLQNKTQTNIDKARLLLQDLASRVVLSENPLDSPAIGLQKQPLFETNRNLFYKSIED 202
           V +L +N     +D A+LLL   A  ++   N     +I +   P F T + L  K   +
Sbjct: 5   VATLCENSNDDFLDAAKLLLT-YADNILRFPNEEKYRSIRIGN-PTFST-KLLPIKGAVE 61

Query: 203 LIFKFRYKDAENHLIFAQHTTLKIINLM 286
            +F+  +++AE HL+F +  +++ + L+
Sbjct: 62  CLFEMGFEEAETHLVFPKSASVEQLKLI 89


>UniRef50_A7TKA1 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 765

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
 Frame = +2

Query: 17  NDVESLLQNKTQTNIDKARLLLQDLASRVVLSENPLDSPAIGLQKQPLFETNRNLFYKSI 196
           N+ + LLQ +    ++ +  +++++ S  +L+ N L+S    + K   F+   NLF KSI
Sbjct: 686 NNNDELLQRERLQEVNAS--VIREMKSNKILTINELESTITNIVKDR-FQLQHNLFIKSI 742

Query: 197 EDLIFK-FRYKDAEN 238
           + LI K +  KD ++
Sbjct: 743 DYLIDKEYLQKDIDD 757


>UniRef50_Q87RY3 Cluster: Putative uncharacterized protein VP0643;
           n=1; Vibrio parahaemolyticus|Rep: Putative
           uncharacterized protein VP0643 - Vibrio parahaemolyticus
          Length = 599

 Score = 32.3 bits (70), Expect = 9.4
 Identities = 42/167 (25%), Positives = 67/167 (40%), Gaps = 13/167 (7%)
 Frame = +2

Query: 137 IGLQKQPLFETNRN----LFYKSIEDLIFKFRYKDAENHLIFAQH-----TTLKIINLMS 289
           I    QP F   ++    L  KS+ +   + R    E+ ++FAQH     TT K     S
Sbjct: 37  IPTHSQPFFGNKKSIKISLRTKSVAEARVRARQLSVEHDVLFAQHETLATTTSKPKGYAS 96

Query: 290 YXXXXXXXXXXXXAQNLTLNKCTNNNV*CFNTPDQ*TEARLVQTPLF*KREKPQLGFPLL 469
                        AQ+  + + T+ N+    T      A++   PL  +RE    G   +
Sbjct: 97  NPLEVLVDVKASQAQHKEITQATSGNL--VGTQSL-LHAQVFTAPLK-ERESVFTGIEAM 152

Query: 470 RQSLCR--CKRWVCRVLPYDAVHKRLERV--GVLAVDVHDWAARRPF 598
           R  LC   C     R+  YDA   R  R+  G +A + +++   +PF
Sbjct: 153 RDDLCELMCDLAENRLSEYDAKLSRSWRIIEGAMASEHYEYFVEQPF 199


>UniRef50_Q6MQ74 Cluster: Putative uncharacterized protein
           precursor; n=1; Bdellovibrio bacteriovorus|Rep: Putative
           uncharacterized protein precursor - Bdellovibrio
           bacteriovorus
          Length = 715

 Score = 32.3 bits (70), Expect = 9.4
 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
 Frame = +2

Query: 137 IGLQKQPLFETNRNLFYK---SIEDLIFKFRYKDAENHLIFAQHTTLK 271
           IG+QK   FET++ LF++    +++  FK +  DA+N   F  + T K
Sbjct: 212 IGMQKPEKFETSKTLFFEIKPYVQNEYFKSKPMDAQNRFGFFVNNTFK 259


>UniRef50_Q5CQ22 Cluster: WD40 repeat protein; n=2;
           Cryptosporidium|Rep: WD40 repeat protein -
           Cryptosporidium parvum Iowa II
          Length = 1050

 Score = 32.3 bits (70), Expect = 9.4
 Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
 Frame = +2

Query: 8   FFLNDVESLLQNKTQTNIDKARLLLQDLASRVVLSENPLDSPAIGLQKQPLFETNRNLFY 187
           F LND+ +  + K+   I+  R ++ DL    V   N     +    +  L +TN +L+ 
Sbjct: 84  FHLNDILNHKEKKSVIEIEIGRCII-DLK---VAKNNIYFIISEAKDQDTLIDTNVSLYK 139

Query: 188 KSIEDLIFKFR--YKDAENHLIFAQHTTLKIIN 280
             I D+I KF        NH  F Q +  KIIN
Sbjct: 140 IPISDIISKFNTSVNQKSNHSKFIQKSLKKIIN 172


>UniRef50_A2EAG5 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 547

 Score = 32.3 bits (70), Expect = 9.4
 Identities = 18/64 (28%), Positives = 32/64 (50%)
 Frame = +2

Query: 11  FLNDVESLLQNKTQTNIDKARLLLQDLASRVVLSENPLDSPAIGLQKQPLFETNRNLFYK 190
           F+N+   L++   QT ID   L LQD+++ +   +N + +P +     P  +T  +    
Sbjct: 270 FMNEFSVLMKESPQTRIDNVELFLQDISAEI---DNIISTPKV--NSSPKLDTLASDITN 324

Query: 191 SIED 202
            IED
Sbjct: 325 VIED 328


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 561,316,817
Number of Sequences: 1657284
Number of extensions: 10579151
Number of successful extensions: 26219
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 25483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26211
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44392209541
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -