Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1480
         (653 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           31   0.032
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    24   3.7  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   6.4  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   6.4  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              23   6.4  
AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase...    23   8.4  

>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 31.1 bits (67), Expect = 0.032
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +1

Query: 352 SSPTGSVNVRQGGAATPSGPPRQARSSSHHADASNPTSSSRHSS 483
           +S T  V    G    P+GP + A + S ++  SN + S RHS+
Sbjct: 240 TSATNGVGEESGCPTIPAGPSKSATNHSINSIQSNDSGSRRHSA 283


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 620 KTSHILVSTYKNPKSHLSI 564
           KT   ++S+ K+P SH+SI
Sbjct: 719 KTEMTIISSLKHPPSHISI 737


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 15/67 (22%), Positives = 28/67 (41%)
 Frame = +1

Query: 283 GAVSFARGSAGFVSRFGPGC*RGSSPTGSVNVRQGGAATPSGPPRQARSSSHHADASNPT 462
           G+++ +  +    S  G G    + PT     +   ++  +G   Q R      DA + T
Sbjct: 392 GSLNGSGSATNGASNGGSGAPATAKPTPKPIPKPAPSSETNGSSSQERGMESSDDAKSET 451

Query: 463 SSSRHSS 483
           SS++  S
Sbjct: 452 SSTKDGS 458


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 15/67 (22%), Positives = 28/67 (41%)
 Frame = +1

Query: 283 GAVSFARGSAGFVSRFGPGC*RGSSPTGSVNVRQGGAATPSGPPRQARSSSHHADASNPT 462
           G+++ +  +    S  G G    + PT     +   ++  +G   Q R      DA + T
Sbjct: 392 GSLNGSGSATNGASNGGSGAPATAKPTPKPIPKPAPSSETNGSSSQERGMESSDDAKSET 451

Query: 463 SSSRHSS 483
           SS++  S
Sbjct: 452 SSTKDGS 458


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 434 ELDRACLGGPDGVAAPP 384
           EL+   L GP G+A PP
Sbjct: 77  ELNCTILAGPSGLAVPP 93


>AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase
           protein.
          Length = 309

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +3

Query: 363 WLGECAPGRRGHPVRTSETSPVQLTPRRRFKPYIFVPTL*SIRELPRI 506
           W G+C  GRR  P+  +  + V    R +F P  F   +  +++ PR+
Sbjct: 40  WGGQCDNGRRQSPIDLTIAAAV----RGQFAPLFFSNYMLPLKQ-PRV 82


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 547,976
Number of Sequences: 2352
Number of extensions: 9783
Number of successful extensions: 27
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)