Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1479
         (706 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   1.8  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   3.2  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   4.2  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   4.2  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    22   4.2  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   4.2  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    22   4.2  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    21   7.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.8  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.8  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 57  IIVDRRKDRWNSVKTVLLRIS 119
           II  R+K +WNS+  +L  +S
Sbjct: 366 IITARKKQQWNSLIKILKTVS 386


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +3

Query: 147 VYVLRPSSFLQKALSEVSSKLFKEEFRFKVLVCS 248
           +Y  R   +L  A++ +   L   +FR   ++CS
Sbjct: 333 LYFCRIMVYLNSAINPILYNLMSSKFRTGFIICS 366


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 388 DEAGRFHARDSRLRYGKRSHTN 453
           D  G  H +  +L+YG  +H N
Sbjct: 48  DFFGNHHIQQQQLQYGYHNHQN 69


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 388 DEAGRFHARDSRLRYGKRSHTN 453
           D  G  H +  +L+YG  +H N
Sbjct: 48  DFFGNHHIQQQQLQYGYHNHQN 69


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -2

Query: 366 ENFSKAIRCCIHSECEYCNSPPRSGV 289
           E   K I   + +EC  CN   + GV
Sbjct: 57  EELKKDIPDALQNECAKCNEKHKEGV 82


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 388 DEAGRFHARDSRLRYGKRSHTN 453
           D  G  H +  +L+YG  +H N
Sbjct: 48  DFFGNHHIQQQQLQYGYHNHQN 69


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 388 DEAGRFHARDSRLRYGKRSHTN 453
           D  G  H +  +L+YG  +H N
Sbjct: 48  DFFGNHHIQQQQLQYGYHNHQN 69


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = -2

Query: 366 ENFSKAIRCCIHSECEYCNSPPRSGV 289
           E   K I   + +EC  CN   + G+
Sbjct: 56  EELKKDIPDALKNECAKCNDKHKEGI 81


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 68   VHYNVEAHIC 39
            +HYN E H+C
Sbjct: 1238 LHYNPEEHMC 1247


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/25 (32%), Positives = 11/25 (44%)
 Frame = +1

Query: 175 CRKRCPRSAANCLRRNSGSKC*CAP 249
           CR     +   CL +  G +C C P
Sbjct: 264 CRPGACHNNGTCLDKVGGFECKCPP 288


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,891
Number of Sequences: 336
Number of extensions: 2816
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)