Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1479
         (706 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0543 + 10427321-10428315,10428440-10429154                       33   0.22 
09_02_0531 + 10312743-10313293,10314313-10315030                       29   2.7  
09_02_0512 + 10101274-10102248,10102363-10102748,10103807-10104503     29   2.7  
07_01_0231 - 1698244-1700154                                           28   6.3  

>09_02_0543 + 10427321-10428315,10428440-10429154
          Length = 569

 Score = 33.1 bits (72), Expect = 0.22
 Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
 Frame = +2

Query: 275 ERSQLTPDLGGELQYSHSEWIQQRIALE-KFSTLMKETS--TKLDDF-MHEIVDCDMGND 442
           ER ++   LG  L+Y H EW Q  +  + K S +M ++S  TKL DF +  +VD D G  
Sbjct: 331 ERYKIILGLGSALRYLHEEWEQCVVHGDIKPSNIMLDSSYNTKLGDFGLARLVDHDKGWQ 390

Query: 443 PTQ 451
            T+
Sbjct: 391 TTK 393


>09_02_0531 + 10312743-10313293,10314313-10315030
          Length = 422

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
 Frame = +2

Query: 275 ERSQLTPDLGGELQYSHSEWIQQRIALE-KFSTLMKETS--TKLDDF-MHEIVD 424
           ER ++   LG  L+Y H EW Q  +  + K S +M ++S  TKL DF +  +VD
Sbjct: 183 ERYKIIMGLGAALRYLHQEWEQCILHGDIKPSNIMVDSSYNTKLGDFGLARLVD 236


>09_02_0512 + 10101274-10102248,10102363-10102748,10103807-10104503
          Length = 685

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
 Frame = +2

Query: 275 ERSQLTPDLGGELQYSHSEWIQQRIALE-KFSTLMKETS--TKLDDF-MHEIVDCDMGND 442
           ER ++   LG  L Y H EW Q  +  + K S +M ++S  TKL DF +  +V  D G  
Sbjct: 453 ERYKIIIGLGSALHYLHQEWEQCVVHGDIKPSNIMLDSSYNTKLGDFGLARLV--DHGAK 510

Query: 443 PTQTKELLDCQG 478
              TK +L   G
Sbjct: 511 SRTTKVVLGTAG 522


>07_01_0231 - 1698244-1700154
          Length = 636

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
 Frame = +2

Query: 248 HGHELYEHFERSQLTPDLGGELQYSHSEWIQQRIALE-KFSTLM--KETSTKLDDFMHEI 418
           HG       +R ++  D+   L Y H EW +  I  + K S ++  KE + +L DF    
Sbjct: 441 HGQPTLNWSQRFKIIKDIASGLLYLHEEWDKVVIHRDVKASNVLIDKEMNARLGDFGLSR 500

Query: 419 VDCDMGND 442
           + CD G++
Sbjct: 501 L-CDHGSN 507


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,883,586
Number of Sequences: 37544
Number of extensions: 305617
Number of successful extensions: 755
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 755
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)