Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1479
         (706 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    28   0.099
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    28   0.099
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    27   0.23 
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      23   3.7  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    22   4.9  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    22   4.9  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    22   4.9  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   4.9  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   8.6  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 27.9 bits (59), Expect = 0.099
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 523 QGEDLLTQVRKPNLTYNIISHVAAVERLLVQLEETEKQF 639
           +G+ L+ Q+    +TYNIIS  AAV RL +   E  + F
Sbjct: 34  EGQFLVRQIYDDEITYNIIS--AAVNRLNIPANEILELF 70


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 27.9 bits (59), Expect = 0.099
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 523 QGEDLLTQVRKPNLTYNIISHVAAVERLLVQLEETEKQF 639
           +G+ L+ Q+    +TYNIIS  AAV RL +   E  + F
Sbjct: 34  EGQFLVRQIYDDEITYNIIS--AAVNRLNIPANEILELF 70


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 26.6 bits (56), Expect = 0.23
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -1

Query: 454  GLCGIVSHIAVDYLVHEIVQLRRCLFHKRRKFL*SYSLL 338
            GLCG   H + +    + V  + CLF K   F+ SY+L+
Sbjct: 1596 GLCGNFDHDSTN----DFVGPKNCLFRKPEHFVASYALI 1630



 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 368  TLMKETSTKLDDFMHEIVDCDMGNDPTQTK 457
            T +KET  K+   M  +V C  G    +TK
Sbjct: 1692 TQVKETDDKICFTMRPVVSCASGCTAVETK 1721


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +2

Query: 353 LEKFSTLMKETSTKLDDFMHEIVDCDMGN 439
           L K  TL  + +T+  DF+ +++ C+M N
Sbjct: 288 LSKIQTL--KLATRYIDFLFQVLHCNMEN 314


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 498 NLNYNSNNTRRRFIN 542
           N NYN+NN ++ + N
Sbjct: 88  NYNYNNNNYKKLYCN 102


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 498 NLNYNSNNTRRRFIN 542
           N NYN+NN ++ + N
Sbjct: 88  NYNYNNNNYKKLYCN 102


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 498 NLNYNSNNTRRRFIN 542
           N NYN+NN ++ + N
Sbjct: 88  NYNYNNNNYKKLYCN 102


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +1

Query: 505 ITIATTQGEDLLTQVRKPNLTYN 573
           +T+A + GE LLT+ + P  + N
Sbjct: 67  VTVAISTGEWLLTEEKLPKTSSN 89


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -2

Query: 357 SKAIRCCIHSECEYCN 310
           S  I+C I+++CE+ N
Sbjct: 57  SYGIKCEIYAKCEFLN 72


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,144
Number of Sequences: 438
Number of extensions: 3618
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)