Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1477
(697 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxida... 25 0.78
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 24 1.4
AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxida... 23 3.2
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 3.2
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 3.2
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 3.2
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 3.2
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 22 4.2
AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment h... 22 4.2
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 22 5.5
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 21 7.3
>AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxidase
subunit 1 protein.
Length = 682
Score = 24.6 bits (51), Expect = 0.78
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 158 LLHWHWCYVYACQG 199
L HWHW VY +G
Sbjct: 205 LHHWHWHLVYPFEG 218
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 23.8 bits (49), Expect = 1.4
Identities = 14/22 (63%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = -3
Query: 173 SASGEDKKPSEIKPSTSD-QKP 111
SA E+KKP KPSTS QKP
Sbjct: 1149 SAKCEEKKPGH-KPSTSSWQKP 1169
>AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxidase
subunit 2 protein.
Length = 683
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 158 LLHWHWCYVY 187
L HWHW VY
Sbjct: 205 LHHWHWHLVY 214
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.2
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 351 GYRHRYCCDQ*AHTRAPDGSSD 416
GYR Y A+T AP+G ++
Sbjct: 851 GYRVEYSAASDAYTHAPEGFNE 872
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.2
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 351 GYRHRYCCDQ*AHTRAPDGSSD 416
GYR Y A+T AP+G ++
Sbjct: 851 GYRVEYSAASDAYTHAPEGFNE 872
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.2
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 351 GYRHRYCCDQ*AHTRAPDGSSD 416
GYR Y A+T AP+G ++
Sbjct: 851 GYRVEYSAASDAYTHAPEGFNE 872
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.2
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 351 GYRHRYCCDQ*AHTRAPDGSSD 416
GYR Y A+T AP+G ++
Sbjct: 851 GYRVEYSAASDAYTHAPEGFNE 872
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 22.2 bits (45), Expect = 4.2
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = -2
Query: 123 GPKTSYGTGKTQRQEKTKETSKREAEEAL 37
G K YG T E TK+T A E +
Sbjct: 1135 GYKVIYGPSDTWFDENTKDTKITAASETI 1163
>AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment
homeodomain protein protein.
Length = 232
Score = 22.2 bits (45), Expect = 4.2
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +3
Query: 468 DSMCGLFPLSPSSVWRTHLALALHLAFPRKTVLPWP 575
D G LSPSS + LH + PR WP
Sbjct: 47 DDTDGRESLSPSSAHTVLIPQPLHPSVPRLGHPQWP 82
Score = 21.8 bits (44), Expect = 5.5
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -2
Query: 645 PTPPVVSKCTLTEDKLDSNPR 583
PT P + +C L + K + PR
Sbjct: 99 PTGPPIVRCALRKHKPNRKPR 119
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 21.8 bits (44), Expect = 5.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 192 AKGE*WVFVFNDRIIRFQKSYSSM 263
A G W++V ND IR+ S S +
Sbjct: 545 AVGIAWLYVDNDCCIRYDVSLSGL 568
Score = 21.0 bits (42), Expect = 9.6
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1
Query: 358 LYPGTVAVSSPDPHDDKFV 302
LY G +AVS P+D V
Sbjct: 495 LYSGNLAVSVATPNDTSLV 513
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 21.4 bits (43), Expect = 7.3
Identities = 12/28 (42%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
Frame = -1
Query: 544 AKCSASARCVRHTLDG---ERGNKPHIL 470
A C+AS RC +DG E N P L
Sbjct: 526 ANCTASTRCWEVFMDGICNEDCNNPECL 553
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,801
Number of Sequences: 336
Number of extensions: 3904
Number of successful extensions: 19
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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