Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1477
(697 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80753-1|AAB91447.1| 413|Homo sapiens CAGL79 protein. 91 3e-18
AB040880-1|BAA95971.1| 1721|Homo sapiens KIAA1447 protein protein. 81 3e-15
BC131808-1|AAI31809.1| 337|Homo sapiens LOC155036 protein protein. 44 5e-04
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 33 0.97
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 33 0.97
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 33 0.97
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 33 0.97
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 33 0.97
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 33 0.97
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 33 0.97
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 33 0.97
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 33 0.97
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 33 0.97
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 33 0.97
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 33 0.97
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 33 0.97
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 33 0.97
>U80753-1|AAB91447.1| 413|Homo sapiens CAGL79 protein.
Length = 413
Score = 91.1 bits (216), Expect = 3e-18
Identities = 43/86 (50%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = -1
Query: 514 RHTLDGERGNKPHILSREETLRDAIXXXXXXXXXXXXSGARVCAYWSQQYRCLYPGTVAV 335
R ++GERGN+PHI E+ L++AI G R+ AYWSQQYRCLYPGTV
Sbjct: 9 RVVVEGERGNRPHIYCLEQLLQEAIIDVRPASTRFLPQGTRIAAYWSQQYRCLYPGTVVR 68
Query: 334 SSPDPHDD-KFVAVEFDDGDSGRIAI 260
D DD + VEFDDGD+GRI +
Sbjct: 69 GLLDLEDDGDLITVEFDDGDTGRIPL 94
>AB040880-1|BAA95971.1| 1721|Homo sapiens KIAA1447 protein protein.
Length = 1721
Score = 81.4 bits (192), Expect = 3e-15
Identities = 39/84 (46%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Frame = -1
Query: 505 LDGERGNKPHILSREETLRDAIXXXXXXXXXXXXSGARVCAYWSQQYRCLYPGTV--AVS 332
++GERGN+ I S E+ L++A+ G RVCAYWSQ+ RCLYPG V S
Sbjct: 1199 IEGERGNRQRIYSLEQLLQEAVLDVRPQSSRYLPPGTRVCAYWSQKSRCLYPGNVVRGAS 1258
Query: 331 SPDPHDDKFVAVEFDDGDSGRIAI 260
+ D V VEFDDGD+G IA+
Sbjct: 1259 GDEDEDLDSVVVEFDDGDTGHIAV 1282
Score = 37.5 bits (83), Expect = 0.045
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Frame = -2
Query: 696 KSKDTTDECEVNNP-SKDPTPPVVSKCTL-TEDKLDSNPRVLTAMGGLFYAGKLSAVQAP 523
+ +D +E E + P S + + + C + ED D P ++ L YAG + +Q P
Sbjct: 1133 EEEDEEEEEEDSGPLSAEQSAALARSCAIHKEDLRDGLPVLIPKEDSLLYAGSVRTLQPP 1192
Query: 522 DVYAIHWT-ERGGINHTYCPERRLCE 448
D+Y+I ERG Y E+ L E
Sbjct: 1193 DIYSIVIEGERGNRQRIYSLEQLLQE 1218
>BC131808-1|AAI31809.1| 337|Homo sapiens LOC155036 protein protein.
Length = 337
Score = 44.0 bits (99), Expect = 5e-04
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = -2
Query: 645 PTPPVVSKCTLTEDKLDSNPRVLTAMGG-LFYAGKLSAVQAPDVY-AIHWTERGGINHTY 472
P P C + +D+L RVL M L YAG + V +PD+Y + ERG H Y
Sbjct: 270 PLTPAPRSCIIDKDELKDGLRVLIPMDDKLLYAGHVQTVHSPDIYRVVVEGERGNRPHIY 329
Query: 471 CPER 460
C E+
Sbjct: 330 CLEQ 333
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 33.1 bits (72), Expect = 0.97
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -3
Query: 227 VVEYENPLFTLGKRRRNTSASGEDKKPSEIKPSTSDQKPA 108
V + + PL +GK+ T +KKP+E KP+T ++KPA
Sbjct: 388 VKKQKKPL--VGKKAAATKKPAPEKKPAEKKPTTEEKKPA 425
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 33.1 bits (72), Expect = 0.97
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -3
Query: 227 VVEYENPLFTLGKRRRNTSASGEDKKPSEIKPSTSDQKPA 108
V + + PL +GK+ T +KKP+E KP+T ++KPA
Sbjct: 389 VKKQKKPL--VGKKAAATKKPAPEKKPAEKKPTTEEKKPA 426
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 33.1 bits (72), Expect = 0.97
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -3
Query: 227 VVEYENPLFTLGKRRRNTSASGEDKKPSEIKPSTSDQKPA 108
V + + PL +GK+ T +KKP+E KP+T ++KPA
Sbjct: 389 VKKQKKPL--VGKKAAATKKPAPEKKPAEKKPTTEEKKPA 426
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 33.1 bits (72), Expect = 0.97
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -3
Query: 227 VVEYENPLFTLGKRRRNTSASGEDKKPSEIKPSTSDQKPA 108
V + + PL +GK+ T +KKP+E KP+T ++KPA
Sbjct: 389 VKKQKKPL--VGKKAAATKKPAPEKKPAEKKPTTEEKKPA 426
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 33.1 bits (72), Expect = 0.97
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -3
Query: 227 VVEYENPLFTLGKRRRNTSASGEDKKPSEIKPSTSDQKPA 108
V + + PL +GK+ T +KKP+E KP+T ++KPA
Sbjct: 389 VKKQKKPL--VGKKAAATKKPAPEKKPAEKKPTTEEKKPA 426
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 33.1 bits (72), Expect = 0.97
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -3
Query: 227 VVEYENPLFTLGKRRRNTSASGEDKKPSEIKPSTSDQKPA 108
V + + PL +GK+ T +KKP+E KP+T ++KPA
Sbjct: 389 VKKQKKPL--VGKKAAATKKPAPEKKPAEKKPTTEEKKPA 426
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 33.1 bits (72), Expect = 0.97
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -3
Query: 227 VVEYENPLFTLGKRRRNTSASGEDKKPSEIKPSTSDQKPA 108
V + + PL +GK+ T +KKP+E KP+T ++KPA
Sbjct: 389 VKKQKKPL--VGKKAAATKKPAPEKKPAEKKPTTEEKKPA 426
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 33.1 bits (72), Expect = 0.97
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -3
Query: 227 VVEYENPLFTLGKRRRNTSASGEDKKPSEIKPSTSDQKPA 108
V + + PL +GK+ T +KKP+E KP+T ++KPA
Sbjct: 389 VKKQKKPL--VGKKAAATKKPAPEKKPAEKKPTTEEKKPA 426
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 33.1 bits (72), Expect = 0.97
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -3
Query: 227 VVEYENPLFTLGKRRRNTSASGEDKKPSEIKPSTSDQKPA 108
V + + PL +GK+ T +KKP+E KP+T ++KPA
Sbjct: 389 VKKQKKPL--VGKKAAATKKPAPEKKPAEKKPTTEEKKPA 426
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 33.1 bits (72), Expect = 0.97
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -3
Query: 227 VVEYENPLFTLGKRRRNTSASGEDKKPSEIKPSTSDQKPA 108
V + + PL +GK+ T +KKP+E KP+T ++KPA
Sbjct: 389 VKKQKKPL--VGKKAAATKKPAPEKKPAEKKPTTEEKKPA 426
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 33.1 bits (72), Expect = 0.97
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -3
Query: 227 VVEYENPLFTLGKRRRNTSASGEDKKPSEIKPSTSDQKPA 108
V + + PL +GK+ T +KKP+E KP+T ++KPA
Sbjct: 389 VKKQKKPL--VGKKAAATKKPAPEKKPAEKKPTTEEKKPA 426
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 33.1 bits (72), Expect = 0.97
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -3
Query: 227 VVEYENPLFTLGKRRRNTSASGEDKKPSEIKPSTSDQKPA 108
V + + PL +GK+ T +KKP+E KP+T ++KPA
Sbjct: 389 VKKQKKPL--VGKKAAATKKPAPEKKPAEKKPTTEEKKPA 426
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 33.1 bits (72), Expect = 0.97
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -3
Query: 227 VVEYENPLFTLGKRRRNTSASGEDKKPSEIKPSTSDQKPA 108
V + + PL +GK+ T +KKP+E KP+T ++KPA
Sbjct: 403 VKKQKKPL--VGKKAAATKKPAPEKKPAEKKPTTEEKKPA 440
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 33.1 bits (72), Expect = 0.97
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -3
Query: 227 VVEYENPLFTLGKRRRNTSASGEDKKPSEIKPSTSDQKPA 108
V + + PL +GK+ T +KKP+E KP+T ++KPA
Sbjct: 389 VKKQKKPL--VGKKAAATKKPAPEKKPAEKKPTTEEKKPA 426
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,798,794
Number of Sequences: 237096
Number of extensions: 2421474
Number of successful extensions: 9493
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 9219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9490
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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