Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1477
         (697 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z81038-14|CAI79153.1|  696|Caenorhabditis elegans Hypothetical p...    27   9.7  
Z81038-13|CAB02755.1|  971|Caenorhabditis elegans Hypothetical p...    27   9.7  
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr...    27   9.7  

>Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical protein
            F25C8.3b protein.
          Length = 3175

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +3

Query: 411  SDTDTGLTSKIASRRVSSRDSMCGLFPLSPSSVWRTHLALALHLAF 548
            +D   G +S    R VSS D   G+ PL+ +S ++   A  LH AF
Sbjct: 988  NDDSEGDSSPSTPRTVSSMDD--GVSPLASTSYYKKKSAPKLHFAF 1031


>Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical protein
            F25C8.3a protein.
          Length = 3184

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +3

Query: 411  SDTDTGLTSKIASRRVSSRDSMCGLFPLSPSSVWRTHLALALHLAF 548
            +D   G +S    R VSS D   G+ PL+ +S ++   A  LH AF
Sbjct: 988  NDDSEGDSSPSTPRTVSSMDD--GVSPLASTSYYKKKSAPKLHFAF 1031


>Z81038-14|CAI79153.1|  696|Caenorhabditis elegans Hypothetical
           protein C25A1.10b protein.
          Length = 696

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -1

Query: 61  EKRS*RGTPAKTTPTNTSKK 2
           EK + + TPAKTTP  T+KK
Sbjct: 319 EKPAAKSTPAKTTPKPTAKK 338


>Z81038-13|CAB02755.1|  971|Caenorhabditis elegans Hypothetical
           protein C25A1.10a protein.
          Length = 971

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -1

Query: 61  EKRS*RGTPAKTTPTNTSKK 2
           EK + + TPAKTTP  T+KK
Sbjct: 594 EKPAAKSTPAKTTPKPTAKK 613


>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
            K10C2.1 protein.
          Length = 2314

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 18/73 (24%), Positives = 32/73 (43%)
 Frame = -2

Query: 684  TTDECEVNNPSKDPTPPVVSKCTLTEDKLDSNPRVLTAMGGLFYAGKLSAVQAPDVYAIH 505
            T ++  V  P++   PP     T  +D++ + P +        Y+G L+A  +   Y  +
Sbjct: 1107 TGEQDTVRQPTERDAPPPPPTQTKAQDEVTNLPGLTFTPNFKQYSGYLNA--SAGNYLHY 1164

Query: 504  WTERGGINHTYCP 466
            W     +N TY P
Sbjct: 1165 WLVESQLNATYDP 1177


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,369,860
Number of Sequences: 27780
Number of extensions: 364766
Number of successful extensions: 1087
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)