Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1476
         (559 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010263-1|AAQ23581.1|  363|Drosophila melanogaster RE26521p pro...    62   7e-10
AE014297-1325|AAN13513.1|  363|Drosophila melanogaster CG5344-PB...    62   7e-10
AE014297-1324|AAF54659.1|  363|Drosophila melanogaster CG5344-PA...    62   7e-10
AY061446-1|AAL28994.1|  485|Drosophila melanogaster LD38355p pro...    29   4.3  
AF011224-1|AAC48286.1|  457|Drosophila melanogaster tre oncogene...    29   4.3  
AE013599-1814|AAF58303.1|  457|Drosophila melanogaster CG8085-PB...    29   4.3  
AE013599-1813|AAG22270.1|  571|Drosophila melanogaster CG8085-PA...    29   4.3  
AE013599-1812|AAM68568.1|  485|Drosophila melanogaster CG8085-PC...    29   4.3  

>BT010263-1|AAQ23581.1|  363|Drosophila melanogaster RE26521p
           protein.
          Length = 363

 Score = 61.7 bits (143), Expect = 7e-10
 Identities = 23/33 (69%), Positives = 29/33 (87%)
 Frame = -2

Query: 252 ILKREQKWLRMLDNWEAFMSKNYKKVRERCRKG 154
           I+ RE+KWL M+DNW  +MSKNYKK+R+RCRKG
Sbjct: 45  IIAREKKWLYMIDNWSIYMSKNYKKIRDRCRKG 77


>AE014297-1325|AAN13513.1|  363|Drosophila melanogaster CG5344-PB,
           isoform B protein.
          Length = 363

 Score = 61.7 bits (143), Expect = 7e-10
 Identities = 23/33 (69%), Positives = 29/33 (87%)
 Frame = -2

Query: 252 ILKREQKWLRMLDNWEAFMSKNYKKVRERCRKG 154
           I+ RE+KWL M+DNW  +MSKNYKK+R+RCRKG
Sbjct: 45  IIAREKKWLYMIDNWSIYMSKNYKKIRDRCRKG 77


>AE014297-1324|AAF54659.1|  363|Drosophila melanogaster CG5344-PA,
           isoform A protein.
          Length = 363

 Score = 61.7 bits (143), Expect = 7e-10
 Identities = 23/33 (69%), Positives = 29/33 (87%)
 Frame = -2

Query: 252 ILKREQKWLRMLDNWEAFMSKNYKKVRERCRKG 154
           I+ RE+KWL M+DNW  +MSKNYKK+R+RCRKG
Sbjct: 45  IIAREKKWLYMIDNWSIYMSKNYKKIRDRCRKG 77


>AY061446-1|AAL28994.1|  485|Drosophila melanogaster LD38355p
           protein.
          Length = 485

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -2

Query: 249 LKREQKWLRMLDNWEAFMSKNYKKVRERCRKGNRFAVINK 130
           ++R++KW++ML+ W     K +K+V +      R    NK
Sbjct: 76  MERDKKWMKMLNQWPPPQDKLHKRVYKGIPDRVRMVAWNK 115


>AF011224-1|AAC48286.1|  457|Drosophila melanogaster tre
           oncogene-related protein protein.
          Length = 457

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -2

Query: 249 LKREQKWLRMLDNWEAFMSKNYKKVRERCRKGNRFAVINK 130
           ++R++KW++ML+ W     K +K+V +      R    NK
Sbjct: 76  MERDKKWMKMLNQWPPPQDKLHKRVYKGIPDRVRMVAWNK 115


>AE013599-1814|AAF58303.1|  457|Drosophila melanogaster CG8085-PB,
           isoform B protein.
          Length = 457

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -2

Query: 249 LKREQKWLRMLDNWEAFMSKNYKKVRERCRKGNRFAVINK 130
           ++R++KW++ML+ W     K +K+V +      R    NK
Sbjct: 76  MERDKKWMKMLNQWPPPQDKLHKRVYKGIPDRVRMVAWNK 115


>AE013599-1813|AAG22270.1|  571|Drosophila melanogaster CG8085-PA,
           isoform A protein.
          Length = 571

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -2

Query: 249 LKREQKWLRMLDNWEAFMSKNYKKVRERCRKGNRFAVINK 130
           ++R++KW++ML+ W     K +K+V +      R    NK
Sbjct: 76  MERDKKWMKMLNQWPPPQDKLHKRVYKGIPDRVRMVAWNK 115


>AE013599-1812|AAM68568.1|  485|Drosophila melanogaster CG8085-PC,
           isoform C protein.
          Length = 485

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -2

Query: 249 LKREQKWLRMLDNWEAFMSKNYKKVRERCRKGNRFAVINK 130
           ++R++KW++ML+ W     K +K+V +      R    NK
Sbjct: 76  MERDKKWMKMLNQWPPPQDKLHKRVYKGIPDRVRMVAWNK 115


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,667,893
Number of Sequences: 53049
Number of extensions: 372296
Number of successful extensions: 836
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)