Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1475
         (689 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.4  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   3.1  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   4.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.1  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   5.4  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   5.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.2  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   9.5  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -2

Query: 607 PLPRGSLSNPRSWVWK 560
           P PR   S+P  W W+
Sbjct: 44  PYPRQKKSHPPQWTWQ 59


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -2

Query: 274 PLHCTQECF*THRASLP 224
           P  C Q C  TH+  +P
Sbjct: 559 PADCQQNCMCTHKVDIP 575


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 343 STDPYGVLPLWRSNDLN 393
           + DPYG++  W ++ LN
Sbjct: 141 AVDPYGLVAQWATDALN 157


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = -3

Query: 312 QMWISKQEYDESGPSIVHRSASKRTARRCLQQPAAGCSIQA 190
           Q  +  QEY    PS +H + +        Q   A C +QA
Sbjct: 100 QQQMDGQEYRPDSPSSMHMANTAAPNGHQTQVVYASCKLQA 140


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 323 LPSNRCGSRNRSTTSLAPPLYTG 255
           LP++RC SR  S + + P   +G
Sbjct: 79  LPNSRCNSRESSDSLVQPRCPSG 101


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 212 AGCWRQRRAVRLEALLCTMEGP 277
           A CW Q +AV   ++L   + P
Sbjct: 391 ASCWAQFKAVLWRSILAVFKEP 412


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 212 AGCWRQRRAVRLEALLCTMEGP 277
           A CW Q +AV   ++L   + P
Sbjct: 391 ASCWAQFKAVLWRSILAVFKEP 412


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -2

Query: 274 PLHCTQECF*THRASLP 224
           P  C Q C  TH+  +P
Sbjct: 559 PPDCGQNCMCTHQVDIP 575


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 636 QVITIGNERFRCPEALFPTL 577
           +V+ + N R   PEA FP L
Sbjct: 254 RVVKLSNWREPLPEAYFPKL 273


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,827
Number of Sequences: 336
Number of extensions: 3739
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)