Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1474
         (535 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   3.9  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   6.8  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +1

Query: 316 PPIADLTWSVYRMCNFPRSLVSSTLP*TRRRSMESFTRR 432
           PP+   T +V  +    RSL+   LP   R S E   R+
Sbjct: 119 PPMPITTDNVAAISGVLRSLLDRPLPAPERPSFEGLKRQ 157


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = +2

Query: 380 LLLCPEREGALWSHLLAGRYVQKTIVCAHAPNAKKR 487
           +L  P +    W  L     +++ +   HAP  KKR
Sbjct: 101 ILTTPFKLPYFWKMLTGFGKIEQVLPPHHAPEEKKR 136


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,486
Number of Sequences: 336
Number of extensions: 2936
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)