Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1473
(660 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P24646 Cluster: Polyhedrin; n=212; root|Rep: Polyhedrin... 167 2e-40
UniRef50_Q6JPH0 Cluster: Polyhedrin, major occlusion body protei... 115 9e-25
UniRef50_A2FHI5 Cluster: Putative uncharacterized protein; n=5; ... 34 2.6
UniRef50_O17562 Cluster: Putative uncharacterized protein; n=2; ... 33 4.6
UniRef50_A2QKS5 Cluster: Putative uncharacterized protein; n=1; ... 33 4.6
UniRef50_Q98Q49 Cluster: HEAT SHOCK ATP-DEPENDENT PROTEASE; n=2;... 33 6.1
UniRef50_A0DH03 Cluster: Chromosome undetermined scaffold_5, who... 33 6.1
UniRef50_UPI000155CC43 Cluster: PREDICTED: hypothetical protein;... 33 8.0
UniRef50_A5ZNR6 Cluster: Putative uncharacterized protein; n=5; ... 33 8.0
>UniRef50_P24646 Cluster: Polyhedrin; n=212; root|Rep: Polyhedrin -
Spodoptera littoralis nuclear polyhedrosis virus (SlNPV)
Length = 249
Score = 167 bits (406), Expect = 2e-40
Identities = 77/105 (73%), Positives = 88/105 (83%)
Frame = +2
Query: 215 GQKPKTYPF*RNSRVKPDTMKLIVNWSGKEFLRETWTRFVEDSFPIVNDQEVMDVYLVAN 394
G+ K F VKPDTMKLIVNW+GKEFLRETWTRF+EDSFPIVNDQEVMDV+LV N
Sbjct: 68 GKNQKLTLFKEIRNVKPDTMKLIVNWNGKEFLRETWTRFMEDSFPIVNDQEVMDVFLVVN 127
Query: 395 LKPTRPNRCYKFLAQHALRWEEDYVPHEVIRIVEPSYVA*TTNTE 529
++PTRPNRC++FLAQHALR + +YVPH+VIRIVEPSYV TN E
Sbjct: 128 MRPTRPNRCFRFLAQHALRCDPEYVPHDVIRIVEPSYVG--TNNE 170
Score = 120 bits (288), Expect = 4e-26
Identities = 52/73 (71%), Positives = 63/73 (86%)
Frame = +3
Query: 36 YSYTPTIGRTYVYDNKYYKNLGCLIKNAKRKKHLVEHEQEEKQWDLLDNYMVAEDPFLGP 215
Y+Y+P +G+TYVYDNKYYKNLG +IKNAKRK +E E +E++ D LD Y+VAEDPF+GP
Sbjct: 8 YNYSPHLGKTYVYDNKYYKNLGHVIKNAKRKHDALEREADERELDHLDKYLVAEDPFMGP 67
Query: 216 GKNQKLTLFKEIR 254
GKNQKLTLFKEIR
Sbjct: 68 GKNQKLTLFKEIR 80
Score = 102 bits (244), Expect = 9e-21
Identities = 41/51 (80%), Positives = 48/51 (94%)
Frame = +1
Query: 508 GMNNEYRISLAKKGGGCPIMNIHSEYTNSFESFVNRVIWENFYKPIVYIGT 660
G NNEYRISLAKKGGGCP+MN+H+EYT SFESF+++VIW NFYKPIVY+GT
Sbjct: 166 GTNNEYRISLAKKGGGCPVMNLHAEYTTSFESFIDKVIWYNFYKPIVYVGT 216
>UniRef50_Q6JPH0 Cluster: Polyhedrin, major occlusion body protein;
n=4; Nucleopolyhedrovirus|Rep: Polyhedrin, major
occlusion body protein - Neodiprion lecontii NPV
Length = 247
Score = 115 bits (277), Expect = 9e-25
Identities = 50/98 (51%), Positives = 67/98 (68%)
Frame = +2
Query: 215 GQKPKTYPF*RNSRVKPDTMKLIVNWSGKEFLRETWTRFVEDSFPIVNDQEVMDVYLVAN 394
G+ K F +K +TMKL +NWSG+E+LRE WT F+ED+FPI N QE DV+L
Sbjct: 66 GKHVKMVMFQEVRNIKANTMKLAINWSGREYLREVWTTFIEDTFPINNYQEFTDVFLEIR 125
Query: 395 LKPTRPNRCYKFLAQHALRWEEDYVPHEVIRIVEPSYV 508
P + NR Y+FLAQH LR +ED+VP + IR++EP Y+
Sbjct: 126 CTPNKSNRHYRFLAQHGLRMDEDFVPCDTIRVIEPEYL 163
Score = 68.1 bits (159), Expect = 2e-10
Identities = 27/68 (39%), Positives = 48/68 (70%)
Frame = +3
Query: 51 TIGRTYVYDNKYYKNLGCLIKNAKRKKHLVEHEQEEKQWDLLDNYMVAEDPFLGPGKNQK 230
T ++Y+YDNKYY+ LG +I +AK++KH + E+ ++ L+ +++ DP GPGK+ K
Sbjct: 11 TSAKSYIYDNKYYRGLGDIINSAKKRKHDQDWEKHAEERRALNGFILPLDPRTGPGKHVK 70
Query: 231 LTLFKEIR 254
+ +F+E+R
Sbjct: 71 MVMFQEVR 78
Score = 56.8 bits (131), Expect = 4e-07
Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Frame = +1
Query: 517 NEYRISLAKKGGGCPIMNIHSEYTN-SFESFVNRVIWENFYKPIVYIGT 660
N +SL K+ GGCP+M I ++ E FV+R++W +F++PIVYIGT
Sbjct: 166 NTVSLSLLKRDGGCPMMKIRQQFNELDLEQFVDRILWCHFHRPIVYIGT 214
>UniRef50_A2FHI5 Cluster: Putative uncharacterized protein; n=5;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 468
Score = 34.3 bits (75), Expect = 2.6
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +2
Query: 296 GKEFLRETWTRFVEDSFPIVNDQEVMDVYLVANLKP--TRPNRCYKFLAQHALRWEEDY 466
G EFL +T FV+ ++ +N++ D+Y A ++ + C F A ++E+Y
Sbjct: 103 GIEFLTNIFTEFVKSTYKEINEENFYDIYDCATIQNDINKVEECISFFASKMNDFQEEY 161
>UniRef50_O17562 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 623
Score = 33.5 bits (73), Expect = 4.6
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +3
Query: 282 SSTGAAKSFCVKLGPVLLRTASPL*TTKR*WTCTSSPTSNPHAPTGATSSSLNTLLGGKK 461
SST + S + + T++P T K T TS+PTS + T A ++ +
Sbjct: 162 SSTASVSSTILSSTATTMVTSTPT-TEKSSTTTTSTPTSEATSTTTAMITTTSGTTENPT 220
Query: 462 TT-CPTK*SELWSHPT 506
TT CPTK HPT
Sbjct: 221 TTDCPTKVCRYGFHPT 236
>UniRef50_A2QKS5 Cluster: Putative uncharacterized protein; n=1;
Aspergillus niger|Rep: Putative uncharacterized protein
- Aspergillus niger
Length = 329
Score = 33.5 bits (73), Expect = 4.6
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +3
Query: 282 SSTGAAKSFCVKLGPVLLRTASPL*TTKR*WTCTSSP-TSNPHAPTGATSSSLNTLL 449
S++ + ++ ++L P++L ASP +T +T T+SP TS P + ATS L +L
Sbjct: 39 SNSSSPRTMHIRLPPLMLPGASPRLSTLEPFTTTTSPSTSFPSPSSSATSDPLADIL 95
>UniRef50_Q98Q49 Cluster: HEAT SHOCK ATP-DEPENDENT PROTEASE; n=2;
Mycoplasma|Rep: HEAT SHOCK ATP-DEPENDENT PROTEASE -
Mycoplasma pulmonis
Length = 842
Score = 33.1 bits (72), Expect = 6.1
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Frame = +3
Query: 3 FVIKKPINMPNYSYTPTIGR-----TYVYDNKYYKNLGCLIKNAKRKKHLVEHEQEEKQW 167
F ++ + +P T +GR K YKN ++ K+ L+E E++ K++
Sbjct: 6 FAVRGQVLLPFIEITLDVGRESSKIALELSTKNYKNEIVVVSQENPKQELIESEKDLKEF 65
Query: 168 DLLDNYMVAEDPFLGPGKNQKLTL--FKEIRV 257
LL +VA++P G N K+TL FK ++V
Sbjct: 66 GLLCK-IVAQNPSKG---NIKVTLLPFKRVKV 93
>UniRef50_A0DH03 Cluster: Chromosome undetermined scaffold_5, whole
genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_5, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 2443
Score = 33.1 bits (72), Expect = 6.1
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 4/27 (14%)
Frame = -1
Query: 93 FCNIYCRTR----KYARWWGCMNNSAY 25
+CNI+ RTR A +WGCMN S Y
Sbjct: 1648 YCNIWYRTRYSCENIANYWGCMNTSMY 1674
>UniRef50_UPI000155CC43 Cluster: PREDICTED: hypothetical protein;
n=3; Mammalia|Rep: PREDICTED: hypothetical protein -
Ornithorhynchus anatinus
Length = 752
Score = 32.7 bits (71), Expect = 8.0
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = -2
Query: 515 FMPRRMAPQF*LLRGARSLLPT*ERVERGTCSTCWGVWV*GWRRGT 378
F PRR+ P+ +L + SL P + V R C+ C G V G +RGT
Sbjct: 385 FRPRRLQPERSVLGRSASLKPLYKSVTRKRCNACRGAVV-GRQRGT 429
>UniRef50_A5ZNR6 Cluster: Putative uncharacterized protein; n=5;
Bacteria|Rep: Putative uncharacterized protein -
Ruminococcus obeum ATCC 29174
Length = 227
Score = 32.7 bits (71), Expect = 8.0
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +2
Query: 413 NRCYKFLAQ--HALR-WEEDYVPHEVIRIVEPSYV 508
NRC++ LA H LR W ++Y PH + P +V
Sbjct: 127 NRCFRILADYLHLLRVWRKEYAPHSPEEVFHPRFV 161
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 729,632,455
Number of Sequences: 1657284
Number of extensions: 15693547
Number of successful extensions: 46246
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 43941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46201
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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