Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1472
(621 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16978| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 1e-24
SB_12293| Best HMM Match : OATP (HMM E-Value=0) 100 1e-21
SB_22525| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 3e-21
SB_50148| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 8e-14
SB_145| Best HMM Match : OATP (HMM E-Value=4.2) 60 2e-09
SB_46019| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 4e-09
SB_45072| Best HMM Match : Kazal_2 (HMM E-Value=5.8e-06) 58 4e-09
SB_24105| Best HMM Match : Kazal_2 (HMM E-Value=1.6) 57 1e-08
SB_7514| Best HMM Match : OATP (HMM E-Value=0) 55 4e-08
SB_12005| Best HMM Match : OATP (HMM E-Value=1.1e-15) 54 7e-08
SB_55929| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 9e-08
SB_55930| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_56444| Best HMM Match : fn3 (HMM E-Value=1.2e-21) 53 2e-07
SB_47308| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_10358| Best HMM Match : Gp5_C (HMM E-Value=5.9) 50 2e-06
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 36 0.035
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 34 0.081
SB_31788| Best HMM Match : Kazal_1 (HMM E-Value=0) 33 0.19
SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_39834| Best HMM Match : Kazal_1 (HMM E-Value=0) 32 0.43
SB_18275| Best HMM Match : Kazal_1 (HMM E-Value=0) 31 1.00
SB_58159| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.00
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.00
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 30 1.7
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_29074| Best HMM Match : Kazal_2 (HMM E-Value=3.3e-16) 28 5.3
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 28 5.3
SB_31319| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_4593| Best HMM Match : Ion_trans (HMM E-Value=2.9e-40) 28 7.0
SB_32965| Best HMM Match : Kazal_1 (HMM E-Value=3.4e-19) 28 7.0
SB_26480| Best HMM Match : EGF (HMM E-Value=0) 28 7.0
SB_45623| Best HMM Match : BTB (HMM E-Value=1.4e-36) 27 9.3
SB_23052| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_39831| Best HMM Match : Kazal_1 (HMM E-Value=2.4e-19) 27 9.3
>SB_16978| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 875
Score = 109 bits (263), Expect = 1e-24
Identities = 59/170 (34%), Positives = 81/170 (47%)
Frame = +3
Query: 18 LTAACNLNCLCTETDMEPVCGNNGLTYFSPCHAGCAKFSSHRSNFTNCACVHENSMXXXX 197
L ACN C C+ P+CG GL YFSPC AGC + +R+ +TNCACV +
Sbjct: 636 LRGACNAACNCSVDKYSPLCGPGGLNYFSPCFAGCTTMTRNRT-YTNCACVESAASGA-- 692
Query: 198 XXXXXXXXXXXRAIQ*RHHVPVATAGPCNPPCTTIXXXXXXXXXXXXXXAVTQMPLLMIV 377
+P +G C C + +P ++
Sbjct: 693 -------------------MPSLGSGLCERQCKNLIPFLIGAIVLSVISFSNTIPSKIVT 733
Query: 378 LRSVSEEERSFALGMQFVIFRLFGYIPAPILFGNLIDSTCILWNNHAAAR 527
+RSV++ +R +ALG+QFV RL G +P PILFG+LIDSTC LW + R
Sbjct: 734 IRSVADNQRGYALGLQFVFIRLLGSLPGPILFGHLIDSTCTLWRYNCGTR 783
>SB_12293| Best HMM Match : OATP (HMM E-Value=0)
Length = 1446
Score = 100 bits (239), Expect = 1e-21
Identities = 54/171 (31%), Positives = 79/171 (46%)
Frame = +3
Query: 15 NLTAACNLNCLCTETDMEPVCGNNGLTYFSPCHAGCAKFSSHRSNFTNCACVHENSMXXX 194
N+T CN+ C C+ TD PVCG + +TYFSPC+AGC K F C C+
Sbjct: 894 NMTTLCNVGCQCSSTDYFPVCGVDKITYFSPCYAGCQKRIG-TEEFDKCLCIQP------ 946
Query: 195 XXXXXXXXXXXXRAIQ*RHHVPVATAGPCNPPCTTIXXXXXXXXXXXXXXAVTQMPLLMI 374
A++ A G C+ C + + P +
Sbjct: 947 -------------AVE-GTEFGFAKKGVCDRDCKNLVPFMLGALVLLVANFMNATPNKTV 992
Query: 375 VLRSVSEEERSFALGMQFVIFRLFGYIPAPILFGNLIDSTCILWNNHAAAR 527
VLR V + +R++ALG+Q++ +FG +P P+LFG ID TC LW + +R
Sbjct: 993 VLRCVPDNQRTYALGLQWLFLSVFGSVPGPVLFGTFIDRTCTLWEDSCGSR 1043
>SB_22525| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 674
Score = 99.1 bits (236), Expect = 3e-21
Identities = 54/177 (30%), Positives = 81/177 (45%)
Frame = +3
Query: 27 ACNLNCLCTETDMEPVCGNNGLTYFSPCHAGCAKFSSHRSNFTNCACVHENSMXXXXXXX 206
ACN C C+ PVCG +G++Y+SPC AGC K S FTNC+CV +
Sbjct: 459 ACNSACHCSTAQFRPVCGPDGVSYYSPCFAGC-KASLGMRGFTNCSCVPD---------- 507
Query: 207 XXXXXXXXRAIQ*RHHVPVATAGPCNPPCTTIXXXXXXXXXXXXXXAVTQMPLLMIVLRS 386
+ + + + G C C + +P + +R
Sbjct: 508 --FVVNATTTLSSTNGIVLQNDG-CIQDCKNLPLFVIGLIITAMFSLTNAVPSKITTMRC 564
Query: 387 VSEEERSFALGMQFVIFRLFGYIPAPILFGNLIDSTCILWNNHAAARKADVACCTIS 557
VS++ERS++LG+QF+ RLFG +P PI+ G +ID TC +W + + T S
Sbjct: 565 VSDDERSYSLGIQFIFMRLFGSLPGPIIVGYIIDHTCTMWKTVCGDEQTALTTTTTS 621
>SB_50148| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 606
Score = 74.1 bits (174), Expect = 8e-14
Identities = 52/179 (29%), Positives = 74/179 (41%), Gaps = 2/179 (1%)
Frame = +3
Query: 15 NLTAACNLNCLCTETDMEPVCGNNG-LTYFSPCHAGCAKFSSHRSN-FTNCACVHENSMX 188
++ A CNL C C P+C + +TY+S C AGC + N +TNC+C
Sbjct: 264 SMDAPCNLGCRCRAEVYAPLCTEDDQMTYYSACFAGCEIINRAPGNVYTNCSCFLATGS- 322
Query: 189 XXXXXXXXXXXXXXRAIQ*RHHVPVATAGPCNPPCTTIXXXXXXXXXXXXXXAVTQMPLL 368
RAI+ C P C+ I + +P
Sbjct: 323 --------------RAIK---------GSGCKPDCSNIYPFMVGLALLMFTTFLNNIPAT 359
Query: 369 MIVLRSVSEEERSFALGMQFVIFRLFGYIPAPILFGNLIDSTCILWNNHAAARKADVAC 545
LR + E + SF LG+Q +I R+ +IPAPI+FG ID TC + A A+ C
Sbjct: 360 TATLRCIPESQGSFGLGIQQLIVRILAFIPAPIVFGAAIDVTCRMPQKDACDPAAERNC 418
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 506 EQSCSGEKGGRCLLYDIEQFRYRYVCLCGGIKIVS 610
+ +C CL YD ++FRY + L G K++S
Sbjct: 407 KDACDPAAERNCLEYDTDKFRYVMLALGGTFKLLS 441
>SB_145| Best HMM Match : OATP (HMM E-Value=4.2)
Length = 264
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/51 (45%), Positives = 35/51 (68%)
Frame = +3
Query: 354 QMPLLMIVLRSVSEEERSFALGMQFVIFRLFGYIPAPILFGNLIDSTCILW 506
Q+P ++ LRSV ++ R++ LG+QFV R G +P P++ G +ID TC LW
Sbjct: 116 QIPSKLVSLRSVPDDLRAYGLGLQFVFMRTLGALPGPVIVGTIIDHTCTLW 166
>SB_46019| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 202
Score = 58.4 bits (135), Expect = 4e-09
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +3
Query: 381 RSVSEEERSFALGMQFVIFRLFGYIPAPILFGNLIDSTCILWNNHAAAR 527
R V + +R++ALG+QFV FR G +P+PI +G L D+ CILW R
Sbjct: 69 RCVPDNQRAYALGLQFVFFRALGSLPSPIFYGYLFDTNCILWGESCGQR 117
>SB_45072| Best HMM Match : Kazal_2 (HMM E-Value=5.8e-06)
Length = 361
Score = 58.4 bits (135), Expect = 4e-09
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +3
Query: 381 RSVSEEERSFALGMQFVIFRLFGYIPAPILFGNLIDSTCILWNNHAAAR 527
R V + +R++ALG+QFV FR G +P+PI +G L D+ CILW R
Sbjct: 228 RCVPDNQRAYALGLQFVFFRALGSLPSPIFYGYLFDTNCILWGESCGQR 276
Score = 49.2 bits (112), Expect = 3e-06
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3
Query: 33 NLNCLCTETDMEPVCGNNGLTYFSPCHAGC 122
N +C C ++ PVCG + +TYF+PCHAGC
Sbjct: 132 NADCACVKSQFNPVCGADDVTYFTPCHAGC 161
>SB_24105| Best HMM Match : Kazal_2 (HMM E-Value=1.6)
Length = 361
Score = 56.8 bits (131), Expect = 1e-08
Identities = 22/50 (44%), Positives = 33/50 (66%)
Frame = +3
Query: 357 MPLLMIVLRSVSEEERSFALGMQFVIFRLFGYIPAPILFGNLIDSTCILW 506
+P ++ LRSV + R++ LG+QFV R G +P P++ G +ID TC LW
Sbjct: 108 IPSKIVSLRSVPDTYRAYGLGLQFVFMRTIGALPGPVIIGTIIDHTCTLW 157
Score = 54.4 bits (125), Expect = 7e-08
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +3
Query: 12 VNLTAACNLNCLCTETDMEPVCGNNGLTYFSPCHAGCAKFSSHRSNFTNCAC 167
+ + ACN CLC++ PV T++SPC+AGC + +T CAC
Sbjct: 6 ITMDNACNAGCLCSKAQFSPVKSGEKTTFYSPCYAGCPPQKRTKEGYTGCAC 57
>SB_7514| Best HMM Match : OATP (HMM E-Value=0)
Length = 763
Score = 55.2 bits (127), Expect = 4e-08
Identities = 22/54 (40%), Positives = 34/54 (62%)
Frame = +3
Query: 348 VTQMPLLMIVLRSVSEEERSFALGMQFVIFRLFGYIPAPILFGNLIDSTCILWN 509
+T P ++ LR + ++R++ +G Q RL G IP PI++G LID CILW+
Sbjct: 603 MTMTPTTIVTLRCLPWKDRTYGMGFQMTTVRLLGSIPGPIVYGALIDRACILWD 656
Score = 51.2 bits (117), Expect = 7e-07
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +3
Query: 3 PFKVNLTAACNLNCLCTETDMEPVCGNNGLTYFSPCHAGCAKFSSHRSNFTNCACV 170
P +N A+CN +C C+ P+C + G+TY+S CHAGC + + +C+C+
Sbjct: 514 PAFLNSYASCNADCACSSLPYSPIC-SGGVTYYSSCHAGC-RARDVNGSLADCSCL 567
>SB_12005| Best HMM Match : OATP (HMM E-Value=1.1e-15)
Length = 448
Score = 54.4 bits (125), Expect = 7e-08
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +3
Query: 12 VNLTAACNLNCLCTETDMEPVCGNNGLTYFSPCHAGCAKFSSHRSNFTNCAC 167
+ + ACN CLC++ PV T++SPC+AGC + +T CAC
Sbjct: 338 ITMDNACNAGCLCSKAQFSPVKSGEKTTFYSPCYAGCPPQKRTKEGYTGCAC 389
>SB_55929| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 931
Score = 54.0 bits (124), Expect = 9e-08
Identities = 23/50 (46%), Positives = 30/50 (60%)
Frame = +3
Query: 360 PLLMIVLRSVSEEERSFALGMQFVIFRLFGYIPAPILFGNLIDSTCILWN 509
P + LR + + R++ LG Q + RL G IP PI FG LID CILW+
Sbjct: 508 PATTVTLRCLPVDRRTYGLGFQMTMTRLLGAIPGPIAFGTLIDWNCILWD 557
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +3
Query: 69 PVCGNNGLTYFSPCHAGCAKFSSHRSNFTNCACVHENS 182
PVC N+ +TYFSPCHAGC + + C+C+ +S
Sbjct: 436 PVCSND-VTYFSPCHAGC--LTQINGSLAECSCLLPSS 470
>SB_55930| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 643
Score = 53.6 bits (123), Expect = 1e-07
Identities = 22/44 (50%), Positives = 31/44 (70%)
Frame = +3
Query: 378 LRSVSEEERSFALGMQFVIFRLFGYIPAPILFGNLIDSTCILWN 509
+R +S +ER++ +G Q + RL G IP PILFG+L D CILW+
Sbjct: 535 VRCLSLDERTYGVGFQMTMARLLGSIPGPILFGSLFDLACILWD 578
>SB_56444| Best HMM Match : fn3 (HMM E-Value=1.2e-21)
Length = 651
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +3
Query: 387 VSEEERSFALGMQFVIFRLFGYIPAPILFGNLIDSTCILWNNHAAAR 527
V++ +S ALG+Q++I + G IP P+LFG LID C+LW R
Sbjct: 3 VNDHHKSLALGLQWLIIGIVGRIPGPVLFGYLIDDACLLWQQDCGQR 49
>SB_47308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 50.4 bits (115), Expect = 1e-06
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = +3
Query: 384 SVSEEERSFALGMQFVIFRLFGYIPAPILFGNLIDSTCILW 506
SV + R++ LG+QFV R G +P P++ G +ID TC LW
Sbjct: 2 SVPDNLRAYGLGIQFVFMRTIGALPGPVIIGTIIDHTCTLW 42
>SB_10358| Best HMM Match : Gp5_C (HMM E-Value=5.9)
Length = 189
Score = 49.6 bits (113), Expect = 2e-06
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +3
Query: 381 RSVSEEERSFALGMQFVIFRLFGYIPAPILFGNLIDSTCILW 506
+SV + R++ LG+QFV R G +P P++ G +ID TC LW
Sbjct: 58 QSVPDNLRAYGLGIQFVFKRTLGALPGPVIIGTIIDHTCTLW 99
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 35.5 bits (78), Expect = 0.035
Identities = 13/33 (39%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Frame = +3
Query: 24 AACNLNCLCTE---TDMEPVCGNNGLTYFSPCH 113
++ N +C+C +D +PVCG++G+TY + CH
Sbjct: 571 SSANASCICPTNCPSDWDPVCGDDGVTYQNLCH 603
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 9 KVNLTAACNLNCLCTETDMEPVCGNNGLTYFSPC 110
+VN +A+C C PVCG++G +Y S C
Sbjct: 1744 RVNGSASCQCP-ECRTLKYTPVCGDDGKSYLSTC 1776
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 5/31 (16%)
Frame = +3
Query: 36 LNCLCTETDMEP-----VCGNNGLTYFSPCH 113
L C C + + P VCG++G +YF+ CH
Sbjct: 285 LTCTCRKEENCPGRADYVCGSDGNSYFTECH 315
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 7/44 (15%)
Frame = +3
Query: 42 CLCTETDMEP----VCGNNGLTYFSPCHA---GCAKFSSHRSNF 152
C+C D P VC ++G TY S CH C ++ R F
Sbjct: 1068 CVCPTVDQCPSGSTVCASDGKTYASECHVKVRNCGRYPKLRVIF 1111
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +3
Query: 18 LTAACNLNCLCTET---DMEPVCGNNGLTYFSPC 110
L ++ C+CT++ EP+C +NG T+ + C
Sbjct: 1351 LDSSLQAKCVCTKSCPLSYEPLCASNGKTFPNQC 1384
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Frame = +3
Query: 42 CLCTE-----TDMEPVCGNNGLTYFSPCHAGCAKFSSHRS 146
C+C + + M+PVC G T+ + CH + RS
Sbjct: 71 CVCRDVRECPSSMDPVCSTTGETFITKCHMEVEACTESRS 110
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Frame = +3
Query: 42 CLCTE-----TDMEPVCGNNGLTYFSPCHAGCAKFSSHRS 146
C+C + + M+PVC G T+ + CH + RS
Sbjct: 142 CVCRDVRECPSSMDPVCSTTGETFITKCHMEVEACTESRS 181
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 34.3 bits (75), Expect = 0.081
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 15 NLTAACNLNCLCTETDMEPVCGNNGLTYFSPCH 113
N+T CN + C T + P+CG++G Y++ CH
Sbjct: 654 NVTMFCNCSRACPIT-LRPLCGSDGKNYWNKCH 685
Score = 31.1 bits (67), Expect = 0.75
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 21 TAACNLNCLCTETDMEPVCGNNGLTYFSPC 110
+A C N C ++ PVCG +G TY S C
Sbjct: 798 SAVCECNTECP-SEASPVCGQDGRTYSSTC 826
>SB_31788| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 352
Score = 33.1 bits (72), Expect = 0.19
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 66 EPVCGNNGLTYFSPCHAGCAKFSSHRSNFTNCACVH 173
+PVCG++G+TY S CH AK R + H
Sbjct: 304 DPVCGSDGVTYRSKCHLRVAKCLRKRKRRSQLVLKH 339
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 48 CTETDMEPVCGNNGLTYFSPCHAGCAK 128
C + D +PVCG++G TY + C AK
Sbjct: 240 CPKQD-KPVCGSDGKTYTNGCELATAK 265
>SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4475
Score = 32.7 bits (71), Expect = 0.25
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 21 TAACNLNCLCTETDMEPVCGNNGLTYFSPCHAGCAKFSSHRS 146
T CN NC T +PVCG++G TY + C A S ++
Sbjct: 3967 TCVCNKNCPSTS---KPVCGSDGKTYKNECELKRAACESKKN 4005
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +3
Query: 30 CNLNCLCTETDMEPVCGNNGLTYFSPCHAGCAKFSS-HRSN 149
C CL D EPVCG +G TY + C A HR N
Sbjct: 4237 CPSRCL---PDKEPVCGADGKTYRNLCEIRKASCEGWHRDN 4274
>SB_39834| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 293
Score = 31.9 bits (69), Expect = 0.43
Identities = 13/28 (46%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
Frame = +3
Query: 33 NLNCL--CTETDMEPVCGNNGLTYFSPC 110
+L C+ CT+ ++ PVCG++G TY +PC
Sbjct: 115 SLRCMRRCTK-ELNPVCGSDGKTYDNPC 141
Score = 27.5 bits (58), Expect = 9.3
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = +3
Query: 66 EPVCGNNGLTYFSPC 110
+PVCG++ +TY +PC
Sbjct: 178 QPVCGSDNVTYSNPC 192
>SB_18275| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 325
Score = 30.7 bits (66), Expect = 1.00
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
Frame = +3
Query: 42 CLCTET---DMEPVCGNNGLTYFSPC 110
C+C E + PVCG++G TY +PC
Sbjct: 40 CVCNEACTREYAPVCGSDGKTYPNPC 65
>SB_58159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 443
Score = 30.7 bits (66), Expect = 1.00
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 57 TDMEPVCGNNGLTYFSPCHAGCAKFSSHR 143
++ PVCG + TY S CH AK H+
Sbjct: 212 SEASPVCGTDMRTYASRCHLQLAKCKGHK 240
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 30.7 bits (66), Expect = 1.00
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 12 VNLTAACNLNCLCTETDMEPVCGNNGLTYFSPC 110
VN TA C C + +PVC +NG TY + C
Sbjct: 1588 VNGTATCECFSACPDI-YDPVCASNGKTYSNRC 1619
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +3
Query: 12 VNLTAACNLNCLCTETDMEPVCGNNGLTYFSPC---HAGCAKFSSHRSNFTNCACVHE 176
+N +AAC D PVC ++G TY + C AGC K S + N CV +
Sbjct: 1804 MNGSAACVCQPRPCTADYSPVCASDGQTYPNVCTMDSAGCQK-SMNLKVVRNGTCVRK 1860
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 30 CNLNCLCTETDMEPVCGNNGLTYFSPC 110
C C D E +CG +G++Y SPC
Sbjct: 52 CPQGCPAPNGD-ETICGTDGISYPSPC 77
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Frame = +2
Query: 515 CSGEKG--GRCLLYDIEQF--RYRYVCLCGGIKI 604
C G G + ++YD +QF RY+ V +CGG+ +
Sbjct: 174 CPGNPGPSNQSVIYDTQQFTARYKAVAVCGGVPV 207
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Frame = +3
Query: 42 CLCTETDM--EPVCGNNGLTYFSPC 110
C+C E +PVCG N TY S C
Sbjct: 677 CICPECPQVDKPVCGTNNKTYTSEC 701
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 12 VNLTAACNLNCLCTETDM-EPVCGNNGLTYFSPC 110
+N AC+ C + + +P+CG+N TY + C
Sbjct: 281 LNGRPACSCPSSCGDESLPQPICGSNNKTYANEC 314
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
Frame = +3
Query: 42 CLCT---ETDMEPVCGNNGLTYFSPC 110
C+C + + PVCG++G+TY S C
Sbjct: 2623 CVCPPACKPTLTPVCGSDGVTYESEC 2648
>SB_29074| Best HMM Match : Kazal_2 (HMM E-Value=3.3e-16)
Length = 711
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 48 CTETDMEPVCGNNGLTYFSPCHA 116
C + + PVCG + TY S CHA
Sbjct: 306 CDKEPVTPVCGPDWTTYRSLCHA 328
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2
Query: 437 PFVWIHTGPNTFR*SHRLHVYSVEQSCSGEKGGRC 541
PFV+I T TF SHRLH ++ + E GRC
Sbjct: 888 PFVYI-TRTETFSASHRLHNPTLTNQKNQELFGRC 921
>SB_31319| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1186
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +1
Query: 409 LLSVCSL*YSVCLDTYRPQYFSVISSTPRVFCGTIMQRRERRTLPVVRYRAIPIQVCMLV 588
L+ VC Y +C+ RP+ SV V ++M+RR R +R V ++V
Sbjct: 48 LIIVCDGMYELCISVGRPRRRSVAVLESVVDLQSVMRRRNRHQKAQLRQPCQDCPVALVV 107
Query: 589 WR 594
R
Sbjct: 108 TR 109
>SB_4593| Best HMM Match : Ion_trans (HMM E-Value=2.9e-40)
Length = 1120
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +1
Query: 394 KKNVRLLSVCSL*YSVCLDTYRPQYFSVISSTPRVFCGTIMQR-RERRTLPVVRYRAIPI 570
K+ + ++S+ + +VCL R + + S V + R R +R L V+ R +
Sbjct: 808 KRRLSVMSIRHVCTAVCLHRIRNKRRLSVISVRHVCTAVCLHRIRNKRRLSVISVRHVCT 867
Query: 571 QVCMLVWRNK 600
VC+ RNK
Sbjct: 868 AVCLHRIRNK 877
>SB_32965| Best HMM Match : Kazal_1 (HMM E-Value=3.4e-19)
Length = 69
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 66 EPVCGNNGLTYFSPCHAGCAKFSSH 140
+PVCG +G TY + C G A S+
Sbjct: 33 DPVCGTDGKTYGNECMLGAATCHSN 57
>SB_26480| Best HMM Match : EGF (HMM E-Value=0)
Length = 1772
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 108 CHAGCAKFSSHRSNFTNC 161
C G F SH++NFTNC
Sbjct: 730 CPDGTWTFGSHKANFTNC 747
>SB_45623| Best HMM Match : BTB (HMM E-Value=1.4e-36)
Length = 574
Score = 27.5 bits (58), Expect = 9.3
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = -3
Query: 433 ITNCIPRANERSSSLTDLSTIMRSGICVTATTNVMKKSSTRKGKMVVQGGLQGP 272
I C R +S + D ST + I AT V ++ GK+ V GGL P
Sbjct: 460 IGGCHGRITHQSGEVYDPSTERWTFIAPMATARVHCATAVHDGKLWVFGGLSEP 513
>SB_23052| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 479
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 66 EPVCGNNGLTYFSPCHAGCAK 128
+PVCG NG TY S C A A+
Sbjct: 228 KPVCGVNGETYSSICGAHSAR 248
>SB_39831| Best HMM Match : Kazal_1 (HMM E-Value=2.4e-19)
Length = 173
Score = 27.5 bits (58), Expect = 9.3
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = +3
Query: 66 EPVCGNNGLTYFSPC 110
+PVCG++ +TY +PC
Sbjct: 35 QPVCGSDNVTYSNPC 49
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,394,224
Number of Sequences: 59808
Number of extensions: 324429
Number of successful extensions: 1024
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1020
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1536271375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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