SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1472
         (621 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40953-6|AAB52651.1|  809|Caenorhabditis elegans Hypothetical pr...    96   2e-20
AL032660-2|CAA21751.1|  690|Caenorhabditis elegans Hypothetical ...    75   3e-14
Z81016-5|CAB02665.3|  640|Caenorhabditis elegans Hypothetical pr...    63   1e-10
U39993-2|AAK72059.1|  744|Caenorhabditis elegans Hypothetical pr...    59   3e-09
U39993-3|AAK72060.1|  728|Caenorhabditis elegans Hypothetical pr...    57   1e-08
AL021475-1|CAA16312.1|  758|Caenorhabditis elegans Hypothetical ...    52   4e-07
U40415-5|AAK39251.1|  655|Caenorhabditis elegans Hypothetical pr...    49   2e-06
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p...    33   0.22 
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt...    33   0.22 
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr...    31   0.50 
Z71180-3|CAA94892.2|  763|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical p...    29   3.5  
Z50797-9|CAL36516.1|  640|Caenorhabditis elegans Hypothetical pr...    29   3.5  
AL021474-7|CAA16311.2|  763|Caenorhabditis elegans Hypothetical ...    29   3.5  
AF125955-5|AAO12427.1|  273|Caenorhabditis elegans Hypothetical ...    29   3.5  
AF125955-4|AAO12428.1|  181|Caenorhabditis elegans Hypothetical ...    29   3.5  
AF125955-3|AAD14720.1|  336|Caenorhabditis elegans Hypothetical ...    29   3.5  
Z71259-3|CAE17785.1|  235|Caenorhabditis elegans Hypothetical pr...    28   6.2  
U55365-8|AAA98573.2|  383|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z98877-12|CAB63409.1|  528|Caenorhabditis elegans Hypothetical p...    27   8.2  
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical...    27   8.2  
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ...    27   8.2  

>U40953-6|AAB52651.1|  809|Caenorhabditis elegans Hypothetical protein
            F53B1.8 protein.
          Length = 809

 Score = 96.3 bits (229), Expect = 2e-20
 Identities = 55/187 (29%), Positives = 92/187 (49%), Gaps = 5/187 (2%)
 Frame = +3

Query: 18   LTAACNLNCLCTETDMEPVCG--NNG--LTYFSPCHAGCAK-FSSHRSNFTNCACVHENS 182
            L  +CN  C C  ++  PVC   ++G   TY+SPC+AGC++ +S+    +T C+CV  N+
Sbjct: 596  LMNSCNKQCTCDPSEYRPVCAELDDGRQFTYYSPCYAGCSETYSASLKEYTECSCVPTNT 655

Query: 183  MXXXXXXXXXXXXXXXRAIQ*RHHVPVATAGPCNPPCTTIXXXXXXXXXXXXXXAVTQMP 362
                                 ++   +   G C P CT +                  +P
Sbjct: 656  ---------------------KNRPRIVKKGVCEPQCTELLWFLLLFAPLSFCTFAIAVP 694

Query: 363  LLMIVLRSVSEEERSFALGMQFVIFRLFGYIPAPILFGNLIDSTCILWNNHAAARKADVA 542
            ++ ++LR+V   ERSFALG+Q+++ R+ G IPAP+LFG + D +CI + + +    +   
Sbjct: 695  IISVILRTVDYNERSFALGIQWIMIRVIGTIPAPVLFGWMFDVSCIKYQSDSCGSSS--G 752

Query: 543  CCTISSN 563
             C + SN
Sbjct: 753  GCLMYSN 759


>AL032660-2|CAA21751.1|  690|Caenorhabditis elegans Hypothetical
           protein Y70G10A.3 protein.
          Length = 690

 Score = 75.4 bits (177), Expect = 3e-14
 Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 4/168 (2%)
 Frame = +3

Query: 15  NLTAACNLNCLCTETDMEPVCGNN-GLTYFSPCHAGCAKFSS--HRSNFTNCACVHENSM 185
           ++++ CN +C C + +  PVC  N G  Y+S CHAGC   ++    S ++ C C+  NS 
Sbjct: 448 SISSTCNADCHC-KMEWNPVCDRNTGHMYYSACHAGCTGRTTIDGSSQWSGCGCLTSNST 506

Query: 186 XXXXXXXXXXXXXXXRAIQ*RHHVPVATAGPCNPPCTTIXXXXXXXXXXXXXXAVTQ-MP 362
                               + H  V   G C+  C                 +    +P
Sbjct: 507 FHNLIHGI------------KEHPDVLNQGYCHQDCGYREYILMVTLFITVVASFASGIP 554

Query: 363 LLMIVLRSVSEEERSFALGMQFVIFRLFGYIPAPILFGNLIDSTCILW 506
              I+LR V  ++R+ ALG+ +   RL G+IP  ILFG +ID+ C+ W
Sbjct: 555 TQQIMLRVVPFDQRTLALGVNWTFVRLLGFIPGGILFGIIIDTACLEW 602


>Z81016-5|CAB02665.3|  640|Caenorhabditis elegans Hypothetical
           protein F21G4.1 protein.
          Length = 640

 Score = 63.3 bits (147), Expect = 1e-10
 Identities = 31/75 (41%), Positives = 44/75 (58%)
 Frame = +3

Query: 357 MPLLMIVLRSVSEEERSFALGMQFVIFRLFGYIPAPILFGNLIDSTCILWNNHAAARKAD 536
           M  +MIVLRSV +EE+  AL +   I  LFG+IPAP+++G  ID  CILWN      + +
Sbjct: 518 MVTMMIVLRSVFDEEKVIALSLASFITNLFGFIPAPVIYGFFIDLCCILWNRQCPNERGN 577

Query: 537 VACCTISSNSDTGMY 581
             C    ++  T M+
Sbjct: 578 --CVLYDNDMFTKMF 590



 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = +3

Query: 84  NGLTYFSPCHAGCAKFSSHRSNFTNCACVHEN 179
           NG  ++SPCHAGC ++  + + ++NC C + N
Sbjct: 454 NGQNFYSPCHAGCTEYDIYSNTWSNCQCAYGN 485


>U39993-2|AAK72059.1|  744|Caenorhabditis elegans Hypothetical
           protein F47E1.2 protein.
          Length = 744

 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 24/51 (47%), Positives = 39/51 (76%)
 Frame = +3

Query: 357 MPLLMIVLRSVSEEERSFALGMQFVIFRLFGYIPAPILFGNLIDSTCILWN 509
           +P ++I+LRSV  E RS +LG+Q +   LFG +P+PIL+G +ID+ C++W+
Sbjct: 619 VPAMLILLRSVPPETRSLSLGLQGMAVSLFGTLPSPILWGLVIDAACLVWD 669



 Score = 58.0 bits (134), Expect = 5e-09
 Identities = 24/55 (43%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
 Frame = +3

Query: 15  NLTAACNLNCLCTETDMEPVCGNNGLTYFSPCHAGCAKFSSHRS----NFTNCAC 167
           N T  CN  C C    + PVC   G  YFSPCHAGC +   + S    +FT+C C
Sbjct: 527 NFTRECNSQCSCENARLYPVCDQTGFAYFSPCHAGCREAMQYGSDPVLDFTSCQC 581


>U39993-3|AAK72060.1|  728|Caenorhabditis elegans Hypothetical
           protein F47E1.4 protein.
          Length = 728

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
 Frame = +3

Query: 15  NLTAACNLNCLCTETDMEPVCGNNGLTYFSPCHAGCAKFSSHRSN----FTNCACV 170
           N T  CN  C C    + PVC  +G  YFSPCHAGC + +   S+    F +C CV
Sbjct: 519 NFTNECNSQCSCENAHLYPVCSADGTAYFSPCHAGCREATQFGSDPVIGFASCECV 574



 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 21/54 (38%), Positives = 37/54 (68%)
 Frame = +3

Query: 348 VTQMPLLMIVLRSVSEEERSFALGMQFVIFRLFGYIPAPILFGNLIDSTCILWN 509
           V  +P ++I+LRSV    RS ++G+Q +   LFG +P+ I++G +ID+ C +W+
Sbjct: 608 VAVVPDMLILLRSVDVGSRSLSMGLQGMAISLFGTLPSSIIWGLVIDTACRVWD 661


>AL021475-1|CAA16312.1|  758|Caenorhabditis elegans Hypothetical
           protein Y32F6B.1 protein.
          Length = 758

 Score = 51.6 bits (118), Expect = 4e-07
 Identities = 21/50 (42%), Positives = 34/50 (68%)
 Frame = +3

Query: 357 MPLLMIVLRSVSEEERSFALGMQFVIFRLFGYIPAPILFGNLIDSTCILW 506
           +P ++IVLR+V  E RS +LG    +  L   +P+PI++G +ID +C+LW
Sbjct: 610 VPGMLIVLRAVPPEHRSVSLGFNGFLVSLLATLPSPIIWGKIIDMSCLLW 659



 Score = 51.2 bits (117), Expect = 6e-07
 Identities = 20/43 (46%), Positives = 27/43 (62%)
 Frame = +3

Query: 30  CNLNCLCTETDMEPVCGNNGLTYFSPCHAGCAKFSSHRSNFTN 158
           C  +C+C +T + PVC  +G  Y+SPCHAGCA    + S F N
Sbjct: 512 CRDDCMCEQTPLYPVCDVSGSAYYSPCHAGCAMGWKNYSIFDN 554


>U40415-5|AAK39251.1|  655|Caenorhabditis elegans Hypothetical
           protein K02G10.5 protein.
          Length = 655

 Score = 49.2 bits (112), Expect = 2e-06
 Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
 Frame = +3

Query: 30  CNLNCLCTETDMEPVCGNNG-LTYFSPCHAGCAKFSSHR---SNFTNCAC 167
           C+ NC C ++   PVC  +  LT+ SPCHAGCA     +   SN+TNC C
Sbjct: 445 CSENCHC-DSFFNPVCSEDSKLTFLSPCHAGCADMPGIKFGASNWTNCGC 493



 Score = 36.3 bits (80), Expect = 0.018
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = +3

Query: 378 LRSVSEEERSFALGMQFVIFRLFGYIPAPILFGNLIDSTCILWNNHAAARK 530
           LR V+ + R       ++  R+ G IP  I+FG +ID  C+ W     ++K
Sbjct: 538 LRVVNHKHRDHFTCFGWLWMRILGSIPGAIVFGYIIDVNCMYWQKDCVSQK 588


>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
           protein F41G3.12 protein.
          Length = 1483

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
 Frame = +3

Query: 15  NLTAACNLNCLCTETDMEP---VCGNNGLTYFSPCHAGCAKFSSHRSNFTNCA 164
           N  A C     C   +ME    VCG +G+TY S CH    K + H+S F   A
Sbjct: 529 NEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECH--MKKSACHQSKFVMTA 579



 Score = 29.9 bits (64), Expect = 1.5
 Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
 Frame = +3

Query: 30  CNLNCLCTETDMEPVCGNNGLTYFSPCH---AGCAK 128
           C+ NC         +CG NG+ Y S CH   A C K
Sbjct: 605 CSYNCPANPPLSARICGENGVLYPSLCHLQLASCQK 640



 Score = 29.1 bits (62), Expect = 2.7
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
 Frame = +3

Query: 24  AAC-NLNCLCTETDME---PVCGNNGLTYFSPCH 113
           A C N  C C   ++    P+CG++G+ Y + CH
Sbjct: 674 ATCHNWACTCPTCNLSSNYPICGSDGIVYNNQCH 707



 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +3

Query: 9   KVNLTAACNLNCLCTETDMEPVCGNNGLTYFSPC 110
           K + TA C     C +  M PVC  NG T+ + C
Sbjct: 384 KPDRTAECECPNRCEDV-MRPVCATNGETFDNEC 416


>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
           protein) homologfamily member protein.
          Length = 1473

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
 Frame = +3

Query: 15  NLTAACNLNCLCTETDMEP---VCGNNGLTYFSPCHAGCAKFSSHRSNFTNCA 164
           N  A C     C   +ME    VCG +G+TY S CH    K + H+S F   A
Sbjct: 537 NEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECH--MKKSACHQSKFVMTA 587



 Score = 29.9 bits (64), Expect = 1.5
 Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
 Frame = +3

Query: 30  CNLNCLCTETDMEPVCGNNGLTYFSPCH---AGCAK 128
           C+ NC         +CG NG+ Y S CH   A C K
Sbjct: 613 CSYNCPANPPLSARICGENGVLYPSLCHLQLASCQK 648



 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +3

Query: 9   KVNLTAACNLNCLCTETDMEPVCGNNGLTYFSPC 110
           K + TA C     C +  M PVC  NG T+ + C
Sbjct: 392 KPDRTAECECPNRCEDV-MRPVCATNGETFDNEC 424


>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
           protein F29G6.1 protein.
          Length = 1170

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +3

Query: 30  CNLNCLCTETDMEPVCGNNGLTYFSPC 110
           CN NC  T T+ +PVC  NG  Y + C
Sbjct: 115 CNHNC--TNTEFDPVCDTNGSVYRNLC 139



 Score = 30.7 bits (66), Expect = 0.88
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 6   FKVNLTAACNLNCLCTETDMEPVCGNNGLTYFSPC 110
           FK   T  C++ C   +   +P+CG NG+T+ + C
Sbjct: 760 FKRENTFNCSMEC---DNSYDPLCGTNGVTFTNAC 791



 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +3

Query: 30  CNLNCLCTETDMEPVCGNNGLTYFSPCHAGCAKFSSHRS 146
           C+ NC    +D  PVC + G T+ + CH G  +  + R+
Sbjct: 814 CDTNC---PSDFSPVCDSKGSTHQNICHFGVKRCIAERT 849


>Z71180-3|CAA94892.2|  763|Caenorhabditis elegans Hypothetical
           protein F22E12.1 protein.
          Length = 763

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -2

Query: 479 ITEKYWGRYVSKQTEYHKLHTESKRTFFFTHRSE 378
           I EKYWGR +++      LH  +  T  F   SE
Sbjct: 147 IDEKYWGRQMNRSMSAESLHVFNNPTESFHQYSE 180


>Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical
           protein T22H6.6a protein.
          Length = 1405

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -2

Query: 503 QNTRGVDEITEKYWGRYVSKQ-TEYHKLHTESKRTFFFTH 387
           ++ R V +I  ++W    + Q  EYHKL T+ K   F  H
Sbjct: 868 KDNRTVSKILGEWWYSLAADQKAEYHKLATQVKEAHFKAH 907


>Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical
           protein T22H6.6a protein.
          Length = 1405

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -2

Query: 503 QNTRGVDEITEKYWGRYVSKQ-TEYHKLHTESKRTFFFTH 387
           ++ R V +I  ++W    + Q  EYHKL T+ K   F  H
Sbjct: 868 KDNRTVSKILGEWWYSLAADQKAEYHKLATQVKEAHFKAH 907


>Z50797-9|CAL36516.1|  640|Caenorhabditis elegans Hypothetical
           protein T22H6.6b protein.
          Length = 640

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -2

Query: 503 QNTRGVDEITEKYWGRYVSKQ-TEYHKLHTESKRTFFFTH 387
           ++ R V +I  ++W    + Q  EYHKL T+ K   F  H
Sbjct: 103 KDNRTVSKILGEWWYSLAADQKAEYHKLATQVKEAHFKAH 142


>AL021474-7|CAA16311.2|  763|Caenorhabditis elegans Hypothetical
           protein F22E12.1 protein.
          Length = 763

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -2

Query: 479 ITEKYWGRYVSKQTEYHKLHTESKRTFFFTHRSE 378
           I EKYWGR +++      LH  +  T  F   SE
Sbjct: 147 IDEKYWGRQMNRSMSAESLHVFNNPTESFHQYSE 180


>AF125955-5|AAO12427.1|  273|Caenorhabditis elegans Hypothetical
           protein F46E10.10b protein.
          Length = 273

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +3

Query: 498 ILWNNHAAARKADVACCTISSN-SDTGMYACV 590
           I+W NH+  +  DV   T++ N ++T  YA V
Sbjct: 183 IIWGNHSGTQFPDVTHATVNKNGTETDAYAAV 214


>AF125955-4|AAO12428.1|  181|Caenorhabditis elegans Hypothetical
           protein F46E10.10c protein.
          Length = 181

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +3

Query: 498 ILWNNHAAARKADVACCTISSN-SDTGMYACV 590
           I+W NH+  +  DV   T++ N ++T  YA V
Sbjct: 28  IIWGNHSGTQFPDVTHATVNKNGTETDAYAAV 59


>AF125955-3|AAD14720.1|  336|Caenorhabditis elegans Hypothetical
           protein F46E10.10a protein.
          Length = 336

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +3

Query: 498 ILWNNHAAARKADVACCTISSN-SDTGMYACV 590
           I+W NH+  +  DV   T++ N ++T  YA V
Sbjct: 183 IIWGNHSGTQFPDVTHATVNKNGTETDAYAAV 214


>Z71259-3|CAE17785.1|  235|Caenorhabditis elegans Hypothetical
           protein F13G3.12 protein.
          Length = 235

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -2

Query: 512 IVPQNTRGVDEITEKYWGRYVSKQTEYHKLHTESKRTFFFTHRSEY 375
           +VP +  G+D   E     Y+ +Q E+ KL   +   +FF H   +
Sbjct: 50  VVPLSAIGLDNALESESVWYIPEQQEFPKLGYLTSHGWFFLHEQHF 95


>U55365-8|AAA98573.2|  383|Caenorhabditis elegans Hypothetical
           protein C12D5.2 protein.
          Length = 383

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = +1

Query: 442 CLDTYRPQYFSVISSTPRVFCGTIMQRRERRTLPVVRYRAIPIQVCMLVWRNKNRI 609
           C   +R  Y  ++ S  R +  +     ++RT P++R RA   + C+LV  N N +
Sbjct: 41  CKTFFRRMY--LLKSELRCYINSDCFDLDKRTEPLLRCRACRFKKCLLVGMNPNAL 94


>Z98877-12|CAB63409.1|  528|Caenorhabditis elegans Hypothetical
           protein Y69H2.12 protein.
          Length = 528

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = +3

Query: 15  NLTAACNLNCLCTETDMEPVCGNNGLTYFSPC-HAGCAKFSSHRSNFTNCAC 167
           N +A    +C+CT+      C  + L   +PC ++G        SN+  C C
Sbjct: 140 NSSATTEYSCICTDQQFGTHCEYDNLCASNPCQNSGNCTMVLENSNYL-CTC 190


>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
           protein Y64G10A.7 protein.
          Length = 1651

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 6/57 (10%)
 Frame = +3

Query: 30  CNLNCL--CTETDMEPVCGN----NGLTYFSPCHAGCAKFSSHRSNFTNCACVHENS 182
           CNL C   C     +PV G     +GL Y   C   C  F+  ++    C C  ENS
Sbjct: 673 CNLKCRMDCPNGRCDPVFGYCTCPDGL-YGQSCEKPCPHFTFGKNCRFPCKCARENS 728


>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
           protein Y64G10A.7 protein.
          Length = 1651

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 6/57 (10%)
 Frame = +3

Query: 30  CNLNCL--CTETDMEPVCGN----NGLTYFSPCHAGCAKFSSHRSNFTNCACVHENS 182
           CNL C   C     +PV G     +GL Y   C   C  F+  ++    C C  ENS
Sbjct: 673 CNLKCRMDCPNGRCDPVFGYCTCPDGL-YGQSCEKPCPHFTFGKNCRFPCKCARENS 728


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,807,259
Number of Sequences: 27780
Number of extensions: 233448
Number of successful extensions: 782
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 781
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -