Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1470
(697 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 186 1e-47
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 186 1e-47
SB_56| Best HMM Match : Actin (HMM E-Value=0) 186 1e-47
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 186 1e-47
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 186 1e-47
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 8e-31
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 128 6e-30
SB_54| Best HMM Match : Actin (HMM E-Value=0) 106 2e-23
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 6e-22
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 98 7e-21
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 61 7e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 58 5e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 56 2e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 54 1e-07
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 35 0.072
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 31 0.67
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.67
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 31 0.89
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 31 0.89
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 31 0.89
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 31 1.2
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 29 3.6
SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_20112| Best HMM Match : EGF (HMM E-Value=0) 29 3.6
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 29 3.6
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 29 3.6
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 29 3.6
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 29 3.6
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 29 3.6
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 29 4.8
SB_634| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0) 29 4.8
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 4.8
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 29 4.8
SB_41539| Best HMM Match : PUD (HMM E-Value=0.42) 28 6.3
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 28 6.3
SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7) 28 6.3
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_23472| Best HMM Match : HIT (HMM E-Value=0.43) 28 6.3
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_18966| Best HMM Match : RVT_1 (HMM E-Value=0.028) 28 6.3
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_10665| Best HMM Match : PT (HMM E-Value=6.2) 28 6.3
SB_42341| Best HMM Match : DUF701 (HMM E-Value=3) 28 6.3
SB_40412| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32) 28 6.3
SB_12041| Best HMM Match : PHD (HMM E-Value=0.001) 28 6.3
SB_12008| Best HMM Match : RVT_1 (HMM E-Value=0) 28 6.3
SB_45111| Best HMM Match : rve (HMM E-Value=1.2e-24) 28 8.3
SB_41475| Best HMM Match : HSA (HMM E-Value=7.5) 28 8.3
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 28 8.3
SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036) 28 8.3
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 28 8.3
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 186 bits (454), Expect = 1e-47
Identities = 85/91 (93%), Positives = 87/91 (95%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416
G + VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 417 APLNPKANREKMTQIMFETFNTPAMYVAIQA 509
APLNPKANREKMTQIMFETFN+PAMYVAIQA
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQA 139
Score = 130 bits (315), Expect = 8e-31
Identities = 60/64 (93%), Positives = 64/64 (100%)
Frame = +2
Query: 506 SVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 685
+VLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERG
Sbjct: 139 AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERG 198
Query: 686 YSFT 697
YSFT
Sbjct: 199 YSFT 202
Score = 109 bits (263), Expect = 2e-24
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = +1
Query: 94 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 186 bits (454), Expect = 1e-47
Identities = 85/91 (93%), Positives = 87/91 (95%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416
G + VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 107
Query: 417 APLNPKANREKMTQIMFETFNTPAMYVAIQA 509
APLNPKANREKMTQIMFETFN+PAMYVAIQA
Sbjct: 108 APLNPKANREKMTQIMFETFNSPAMYVAIQA 138
Score = 131 bits (317), Expect = 5e-31
Identities = 61/64 (95%), Positives = 64/64 (100%)
Frame = +2
Query: 506 SVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 685
+VLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG
Sbjct: 138 AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 197
Query: 686 YSFT 697
YSFT
Sbjct: 198 YSFT 201
Score = 107 bits (256), Expect = 1e-23
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +1
Query: 100 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 52
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 186 bits (454), Expect = 1e-47
Identities = 85/91 (93%), Positives = 87/91 (95%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416
G + VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 107
Query: 417 APLNPKANREKMTQIMFETFNTPAMYVAIQA 509
APLNPKANREKMTQIMFETFN+PAMYVAIQA
Sbjct: 108 APLNPKANREKMTQIMFETFNSPAMYVAIQA 138
Score = 131 bits (317), Expect = 5e-31
Identities = 61/64 (95%), Positives = 64/64 (100%)
Frame = +2
Query: 506 SVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 685
+VLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG
Sbjct: 138 AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 197
Query: 686 YSFT 697
YSFT
Sbjct: 198 YSFT 201
Score = 108 bits (259), Expect = 5e-24
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +1
Query: 100 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 52
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 186 bits (454), Expect = 1e-47
Identities = 85/91 (93%), Positives = 87/91 (95%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416
G + VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 417 APLNPKANREKMTQIMFETFNTPAMYVAIQA 509
APLNPKANREKMTQIMFETFN+PAMYVAIQA
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQA 139
Score = 131 bits (317), Expect = 5e-31
Identities = 61/64 (95%), Positives = 64/64 (100%)
Frame = +2
Query: 506 SVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 685
+VLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG
Sbjct: 139 AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 198
Query: 686 YSFT 697
YSFT
Sbjct: 199 YSFT 202
Score = 114 bits (274), Expect = 7e-26
Identities = 51/53 (96%), Positives = 53/53 (100%)
Frame = +1
Query: 94 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 186 bits (454), Expect = 1e-47
Identities = 85/91 (93%), Positives = 87/91 (95%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416
G + VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 417 APLNPKANREKMTQIMFETFNTPAMYVAIQA 509
APLNPKANREKMTQIMFETFN+PAMYVAIQA
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQA 139
Score = 109 bits (263), Expect = 2e-24
Identities = 48/53 (90%), Positives = 52/53 (98%)
Frame = +1
Query: 94 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/35 (85%), Positives = 33/35 (94%), Gaps = 2/35 (5%)
Frame = +2
Query: 506 SVLSLYASGRTTGIVLDSGDGVSHTVPIYE--GYA 604
+VLSLYASGRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 139 AVLSLYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 130 bits (315), Expect = 8e-31
Identities = 60/64 (93%), Positives = 64/64 (100%)
Frame = +2
Query: 506 SVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 685
+VLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERG
Sbjct: 101 AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERG 160
Query: 686 YSFT 697
YSFT
Sbjct: 161 YSFT 164
Score = 108 bits (259), Expect = 5e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +1
Query: 100 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 52
Score = 77.0 bits (181), Expect = 1e-14
Identities = 35/43 (81%), Positives = 36/43 (83%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 365
G + VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +3
Query: 438 NREKMTQIMFETFNTPAMYVAIQA 509
N + M +IMFETFN+PAMYVAIQA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQA 101
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 128 bits (308), Expect = 6e-30
Identities = 58/64 (90%), Positives = 62/64 (96%)
Frame = +2
Query: 506 SVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 685
+VLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLAGRDLTDYLMK++TERG
Sbjct: 17 AVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKLMTERG 76
Query: 686 YSFT 697
YSFT
Sbjct: 77 YSFT 80
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3
Query: 459 IMFETFNTPAMYVAIQA 509
IMFE FN+PA+YVAIQA
Sbjct: 1 IMFEAFNSPAVYVAIQA 17
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 106 bits (254), Expect = 2e-23
Identities = 46/63 (73%), Positives = 55/63 (87%)
Frame = +2
Query: 506 SVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 685
+V++LYASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERG
Sbjct: 2183 AVMALYASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERG 2242
Query: 686 YSF 694
YSF
Sbjct: 2243 YSF 2245
Score = 83.8 bits (198), Expect = 1e-16
Identities = 37/55 (67%), Positives = 45/55 (81%)
Frame = +3
Query: 345 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQA 509
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QA
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQA 2183
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 118 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 219
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 101 bits (242), Expect = 6e-22
Identities = 46/99 (46%), Positives = 66/99 (66%), Gaps = 1/99 (1%)
Frame = +3
Query: 216 SGRDGRYGTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPE 392
S + G + L+VGDEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P
Sbjct: 44 SQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPR 103
Query: 393 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQA 509
VLLTE PLNP NREKM ++MFE + +Y+AIQA
Sbjct: 104 NTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQA 142
Score = 93.9 bits (223), Expect = 1e-19
Identities = 39/63 (61%), Positives = 52/63 (82%)
Frame = +2
Query: 506 SVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 685
+VL+LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+AGRD+T YL+K++ RG
Sbjct: 142 AVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKLMLLRG 201
Query: 686 YSF 694
Y+F
Sbjct: 202 YAF 204
Score = 44.4 bits (100), Expect = 9e-05
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +1
Query: 112 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 210
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 97.9 bits (233), Expect = 7e-21
Identities = 41/63 (65%), Positives = 56/63 (88%)
Frame = +2
Query: 506 SVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 685
+VLSLYA+GRTTG+VLD+GDGVSH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G
Sbjct: 164 AVLSLYATGRTTGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEG 223
Query: 686 YSF 694
+ F
Sbjct: 224 HCF 226
Score = 64.9 bits (151), Expect = 6e-11
Identities = 25/39 (64%), Positives = 34/39 (87%)
Frame = +3
Query: 393 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQA 509
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QA
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQA 164
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 61.3 bits (142), Expect = 7e-10
Identities = 24/65 (36%), Positives = 42/65 (64%)
Frame = +3
Query: 303 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 482
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 483 PAMYV 497
PA ++
Sbjct: 63 PAFFL 67
Score = 51.6 bits (118), Expect = 6e-07
Identities = 24/58 (41%), Positives = 38/58 (65%)
Frame = +2
Query: 506 SVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 679
SVL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T ++ E
Sbjct: 71 SVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQCRQMFEE 128
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 103 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 219
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 58.4 bits (135), Expect = 5e-09
Identities = 23/48 (47%), Positives = 35/48 (72%)
Frame = +2
Query: 539 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 682
TG V+DSGDGV+H +P+ EGY + I + +AGRD+T ++ ++L ER
Sbjct: 62 TGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITFFVQQLLRER 109
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 56.4 bits (130), Expect = 2e-08
Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +2
Query: 512 LSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-TERGY 688
LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +RG+
Sbjct: 770 LSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQRGH 829
Query: 689 SFT 697
+FT
Sbjct: 830 NFT 832
Score = 51.2 bits (117), Expect = 8e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +1
Query: 88 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 234
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/66 (43%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +3
Query: 219 GRDGRYGTEGL--LVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 392
GR + G E L +GDEA K T K+PI H IV +WD ME+ W + LR PE
Sbjct: 273 GRSAK-GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPE 330
Query: 393 EHPVLL 410
+H LL
Sbjct: 331 DHYFLL 336
Score = 32.3 bits (70), Expect = 0.39
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 539 TGIVLDSGDGVSHTVPI 589
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -2
Query: 216 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 100
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +3
Query: 219 GRDGRYGTEGLLVGDEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 389
GR G + GL VG++ S I L+ P + +VT+++ E++ H F + P
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164
Query: 390 EEHPVLLTEAPLNPKANRE 446
HPV++TE NP R+
Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 34.7 bits (76), Expect = 0.072
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 249 LLVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 374
L +GD+ + + L Y P + G + NWD ++IW +TF E
Sbjct: 272 LFIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 106 EVAALVVDNGSGMCKAGFAGDDAPRAV 186
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.67
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 191 GNTARGASSPAKPALHIPEPLSTT 120
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 31.5 bits (68), Expect = 0.67
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 213 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.67
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 191 GNTARGASSPAKPALHIPEPLSTT 120
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 31.1 bits (67), Expect = 0.89
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Frame = +3
Query: 519 CTRPVVPPVSCWTPATVSPTPC-----PSTKDTHSP 611
CT+ +P +TP T TPC PST+ +H+P
Sbjct: 859 CTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +3
Query: 453 TQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTPATVSPTPCPS--TKDTHSPTP 617
+Q+ E +N P+ + + CT +P +TP T TP T T TP
Sbjct: 611 SQVNSERYNAPSQSPCTERYTPCTERYIPCTERYTPCTERYTPSTERYTPSTERYTP 667
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 31.1 bits (67), Expect = 0.89
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 408 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 31.1 bits (67), Expect = 0.89
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 271 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 31.1 bits (67), Expect = 0.89
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 249 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 31.1 bits (67), Expect = 0.89
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 31.1 bits (67), Expect = 0.89
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 31.1 bits (67), Expect = 0.89
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 125 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ ++LSH + H M D +HG RS SCET L T
Sbjct: 173 LTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 191 GNTARGASSPAKPALHIPEPLSTT 120
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/58 (39%), Positives = 26/58 (44%)
Frame = +1
Query: 523 RVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDPHRARVLVH 696
R RS R R+ RRR RR R+P H S SRSR R P R+R H
Sbjct: 221 RSRSRSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSR-SRSPRRRHSRSRSPTH 277
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/65 (26%), Positives = 24/65 (36%)
Frame = +3
Query: 417 APLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTPATVSPTPCPSTK 596
A P A + + +NTP I + P +PP + TP+ P P PS
Sbjct: 888 ASYQPSAPSSMPAPVPLQPYNTPMP--PISSTPYQAPPTLPPTTLTTPSWSQPVPVPSMY 945
Query: 597 DTHSP 611
P
Sbjct: 946 QPQPP 950
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 242 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1065
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +3
Query: 378 RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWT 557
++A + +P + E N K + +K+ Q M +T + + R + W
Sbjct: 866 KIASKHNPEMTEEMRANLKEHLDKINQRMNDTMTL------LYNMPKIMRKFAFELPNWA 919
Query: 558 PATVSPTPCPSTKDTHSP-TPSCV 626
P PT P+ K T +P TPS V
Sbjct: 920 PKIPLPTEPPTEKMTEAPTTPSAV 943
>SB_20112| Best HMM Match : EGF (HMM E-Value=0)
Length = 2112
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +3
Query: 390 EEHPVLLTEAPLNPKANREKMTQIMF-ETFNTPAMYVAIQACSRCTRPVVPPVSCWTPAT 566
EEH ++ T N ++ + MF E +TP + S + P P+S TP+
Sbjct: 2034 EEHVMMETTLHHNNQSMCVPVESGMFREKHHTPPSAHSYGTSSYDSSPQKLPISYLTPSP 2093
Query: 567 VSPTPCPSTKDTHSPTPSC 623
SP S+ +HS +C
Sbjct: 2094 ESPKDWSSSPSSHSDWSNC 2112
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 1641 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 519 CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 620
C+RP PPV+ T +T S T +T T + TP+
Sbjct: 620 CSRPTTPPVTT-TKSTTSSTTKGTTASTTTSTPT 652
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 669 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 224 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 1079 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 22 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +3
Query: 522 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 626
T VVPP+ P V P+P + + SPTPSC+
Sbjct: 207 TPAVVPPI----PTLVVPSPL-TQPEVESPTPSCI 236
>SB_634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/69 (27%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
Frame = +3
Query: 390 EEHPVLLTEAPLNPKANREKMTQIMFETF--NTPAMYVAIQACSRCTRPVVPPVSCWTPA 563
E P + EA P+ R Q F F P + C RC PP + W +
Sbjct: 43 EAPPAVPVEAAAGPRPRRSGPQQDNFGGFAQRVPRHQEILSCCCRCCVKPHPPFASWRNS 102
Query: 564 TVSPTPCPS 590
+ T PS
Sbjct: 103 EEARTDRPS 111
>SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 885
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = -2
Query: 264 HLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 148
H++ + ++SH +HH ++ + +HG R + SCE+ L
Sbjct: 470 HIITKNIVSHLEHHDILY-----KFQHGFRKLRSCESQL 503
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +3
Query: 522 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 620
TRP VP +T PTP P T P P+
Sbjct: 932 TRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/51 (33%), Positives = 20/51 (39%)
Frame = +3
Query: 471 TFNTPAMYVAIQACSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSC 623
T NT + A C R T VPPVS +P PC P +C
Sbjct: 629 TDNTRTRFKAFGECGRTT---VPPVSTSSPTPTPQDPCTGFNCDTPPYSTC 676
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +3
Query: 411 TEAP---LNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTPATVSPTP 581
T+AP L PK T + ET + PA+ +A + + V P + TV+P
Sbjct: 515 TDAPATTLAPKTTIAPETTVAQETTDAPAITMAPETSAAPETTVAPETNAAPETTVAPEI 574
Query: 582 CPSTKDTHSP 611
+T+ T +P
Sbjct: 575 TAATEITAAP 584
>SB_41539| Best HMM Match : PUD (HMM E-Value=0.42)
Length = 1582
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +1
Query: 505 KRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHE 666
K+++ R R R G R+ P + TPP+ PA+ RL HE
Sbjct: 934 KKSIRDSFRRLRRSRKGTRKGDTPRKEGEAGAATPPQSPAAAPQSPPVQRLVHE 987
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +3
Query: 519 CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*P 638
CT P ++ P T + T P TK P PS + T P
Sbjct: 150 CTGTPEPTITSKPPVTETTTTKPETKPPKPPAPSTIPTPP 189
>SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7)
Length = 186
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = -1
Query: 397 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASS--PTKSPSVPYRPS 224
CS + + C + ++V CS + V + ++C+ P + PS
Sbjct: 88 CSPSRAHVDVFPITCSCRCVPHRMVMSMCSPSRVYVDVSPIVCSCRCVPHRVLMSMCSPS 147
Query: 223 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 131
R D FP + R HH+L + + R+H
Sbjct: 148 RADVDVFPITCSRRCVFHHVLMSMCSSSRAH 178
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 513 SRCTRPVVPPVSCWTPATVSPTP-CPSTKDTHSPTPS 620
+R P+ PP C + V PTP S+K + SP+PS
Sbjct: 327 TRTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPS 362
>SB_23472| Best HMM Match : HIT (HMM E-Value=0.43)
Length = 168
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 264 HLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 44 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 80
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 191 GNTARGASSPAKPALHIPEPLSTT 120
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_18966| Best HMM Match : RVT_1 (HMM E-Value=0.028)
Length = 252
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 264 HLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 89 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 125
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 191 GNTARGASSPAKPALHIPEPLSTT 120
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +2
Query: 419 SPQPQGQQREDDPDHVRNIQHARHVRRHPS 508
SP P+ R D+P V A HV HPS
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPS 294
>SB_10665| Best HMM Match : PT (HMM E-Value=6.2)
Length = 215
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +1
Query: 574 PHRAHLRRIRTPPR-HPASGLSRSRPHRLPHEDPH 675
PHR H+ RTP R H + PH P +PH
Sbjct: 161 PHRPHMDPTRTPHRPHMDPTRTSHGPHTDPTRNPH 195
>SB_42341| Best HMM Match : DUF701 (HMM E-Value=3)
Length = 651
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/80 (22%), Positives = 31/80 (38%)
Frame = +3
Query: 324 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 503
TN+ + +W H + P V L + + P N E + ++ F +
Sbjct: 496 TNFSESRCVWLHKEEQQTTHRPSRQVVTLVDYAVCPFVNHEVLVKVHL-LFEERCAVLVG 554
Query: 504 QACSRCTRPVVPPVSCWTPA 563
+C R RP P+ +PA
Sbjct: 555 GSCRRGCRPRRAPLVALSPA 574
>SB_40412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Frame = +1
Query: 472 HSTRPPCTSPSKRALAVRVRSY--HRYRAGLRRRCLPHRAH-LRRIRTPPRHPASGL 633
HST C + + + R + + RAG + H LRR TPP P SGL
Sbjct: 174 HSTGKTCLALGPKEASANPREFTEEQRRAGQGHTPYASKTHPLRRQNTPPPPPKSGL 230
>SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1134
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 264 HLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 673 HIIFHDIMNHIDTHNILV-----KFQHGFRRFFSCETQLITT 709
>SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32)
Length = 698
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 264 HLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 292 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 328
>SB_12041| Best HMM Match : PHD (HMM E-Value=0.001)
Length = 560
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 264 HLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 503 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 539
>SB_12008| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 979
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 264 HLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 129 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 165
>SB_45111| Best HMM Match : rve (HMM E-Value=1.2e-24)
Length = 1575
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = -1
Query: 607 ECVSFVDGHGVGDTVAGVQHDTGGTTGRVQREHAWMATYMAGVLNVSNMIWVIFSLLALG 428
+CVSF D +T GVQ GG G V+R+ +VS+ V++ L
Sbjct: 69 DCVSFEDPFTGVETPLGVQQGGGGGGGGVKRKR--------DPEDVSDKDDVVYELRQTS 120
Query: 427 LRGASVSRTGCS 392
+ ++ RT CS
Sbjct: 121 TKRSTKMRTNCS 132
>SB_41475| Best HMM Match : HSA (HMM E-Value=7.5)
Length = 195
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/55 (29%), Positives = 20/55 (36%)
Frame = +1
Query: 523 RVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDPHRARV 687
RVR H YR HR H R+ + + R HR+ HR V
Sbjct: 138 RVRRVHEYRVHRVHEYRVHRVHEYRVHRVHEYRVHRVHEYRVHRVHEYRVHRVHV 192
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 27.9 bits (59), Expect = 8.3
Identities = 20/74 (27%), Positives = 25/74 (33%)
Frame = +3
Query: 399 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTPATVSPT 578
P T P P T +T TP P P + TP T +PT
Sbjct: 29 PTPTTHTPTKPSPTTPTSTAPT-QTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPT 87
Query: 579 PCPSTKDTHSPTPS 620
TK T + TP+
Sbjct: 88 TSTLTKPTPATTPT 101
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 27.9 bits (59), Expect = 8.3
Identities = 21/73 (28%), Positives = 27/73 (36%)
Frame = +3
Query: 399 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTPATVSPT 578
PVL A P A + TQ + P ++ + P PPV P TV P
Sbjct: 22 PVLTEAATTQPPAPPPEPTQAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTV-PP 80
Query: 579 PCPSTKDTHSPTP 617
P + T P P
Sbjct: 81 PVVTDAPTTVPPP 93
>SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036)
Length = 362
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -1
Query: 316 PCSMGYLRVRIPLLLCASSPTKSPSVPY 233
P ++ +L PLL+ +SP SP++P+
Sbjct: 16 PPTIPFLAATTPLLMVTTSPLTSPTIPF 43
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -1
Query: 316 PCSMGYLRVRIPLLLCASSPTKSPSVPY 233
P ++ +L PLL+ +SP SP++P+
Sbjct: 82 PPTIPFLATTTPLLMVTTSPLPSPTIPF 109
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 27.9 bits (59), Expect = 8.3
Identities = 21/84 (25%), Positives = 32/84 (38%)
Frame = +3
Query: 360 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVP 539
T E VAPE + E ++P+ T + ET TP VA + V
Sbjct: 4182 TMAPETTVAPET--TMAAETTVSPETTEASGTTVASETTTTPETTVAPETTMAPETTVAL 4239
Query: 540 PVSCWTPATVSPTPCPSTKDTHSP 611
+ TV+P + + T +P
Sbjct: 4240 ETTMAPETTVAPETTIAPESTEAP 4263
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 27.9 bits (59), Expect = 8.3
Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Frame = +3
Query: 372 ELRVAPEEHPVL-LTEAP---LNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVP 539
E APE V T AP + P+ +T + ET PA A++ + +VP
Sbjct: 1323 ETSAAPETTMVPETTSAPSTTMAPETTAAPVTTMAPETTAVPATIAALETTATLETTMVP 1382
Query: 540 PVSCWTPATVSP--TPCPSTKDTHSPT--PSCVW 629
+ + TV+P T P+T T P W
Sbjct: 1383 ETTASSETTVAPETTDAPATTLAPETTAAPETTW 1416
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,112,380
Number of Sequences: 59808
Number of extensions: 639757
Number of successful extensions: 2552
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 2044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2529
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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