Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1468
         (764 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC146785-1|AAI46786.1| 1556|Homo sapiens INOC1 protein protein.        31   6.0  
AB033085-1|BAA86573.1| 1561|Homo sapiens KIAA1259 protein protein.     31   6.0  
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ...    30   7.9  
AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.             30   7.9  

>BC146785-1|AAI46786.1| 1556|Homo sapiens INOC1 protein protein.
          Length = 1556

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = +3

Query: 186  CWPKTAVTVLPLMTACGPKSRRYRR*VMIFGHIAQPNPCRLPAAIEKALDFL 341
            C     VT +PL + C  +S  Y R V+  G       C L  A E A D+L
Sbjct: 1011 CVASPRVTAVPLDSYCNDRSAEYERRVLKEGGSLAAKQCLLNGAPELAADWL 1062


>AB033085-1|BAA86573.1| 1561|Homo sapiens KIAA1259 protein protein.
          Length = 1561

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = +3

Query: 186  CWPKTAVTVLPLMTACGPKSRRYRR*VMIFGHIAQPNPCRLPAAIEKALDFL 341
            C     VT +PL + C  +S  Y R V+  G       C L  A E A D+L
Sbjct: 1016 CVASPRVTAVPLDSYCNDRSAEYERRVLKEGGSLAAKQCLLNGAPELAADWL 1067


>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
             marker CA125 protein.
          Length = 22152

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = +3

Query: 72    STVPPAMPSCNVSWITLLPLNALTKTRPSAYPATNLLPCWPKTAVTVL 215
             ST+P ++PS + S  +LL    +  T  S  P T+L P    T+V +L
Sbjct: 10039 STLPQSIPSSSFSVTSLLTPGMVKTTDTSTEPGTSLSPNLSGTSVEIL 10086


>AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.
          Length = 6995

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = +3

Query: 72   STVPPAMPSCNVSWITLLPLNALTKTRPSAYPATNLLPCWPKTAVTVL 215
            ST+P ++PS + S  +LL    +  T  S  P T+L P    T+V +L
Sbjct: 1743 STLPQSIPSSSFSVTSLLTPGMVKTTDTSTEPGTSLSPNLSGTSVEIL 1790


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,236,928
Number of Sequences: 237096
Number of extensions: 2656285
Number of successful extensions: 9224
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9224
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)