Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1466
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 52 4e-07
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 52 4e-07
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 52 4e-07
U51994-2|AAA96065.3| 1311|Caenorhabditis elegans Hypothetical pr... 31 0.94
AF026206-1|AAK39306.1| 260|Caenorhabditis elegans Hypothetical ... 31 0.94
U41021-5|AAA82335.2| 652|Caenorhabditis elegans Hypothetical pr... 30 1.2
AY887908-1|AAX34420.1| 652|Caenorhabditis elegans anion transpo... 30 1.2
AF016433-8|AAB65386.2| 333|Caenorhabditis elegans Hypothetical ... 30 1.6
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 28 6.6
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 52.0 bits (119), Expect = 4e-07
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Frame = +1
Query: 1 PHGLKPKKKWEVEGPLKRANW--KTITPQKMSEKAFWVNVQEDRLASPDILSGLSQKFSS 174
P L PKK +V+GP+++ W TI P+ + ++FWV E++L S + L KF++
Sbjct: 801 PDYLPPKKVPKVDGPMRKFPWGAHTINPRDIPRESFWVGTNEEQLTSDRMFDRLRTKFAT 860
Query: 175 KPVAKK-TEDAVDKAHTLKKVRDLKVL 252
KP A T V ++ KKV+ +V+
Sbjct: 861 KPAANSGTLGGV--LNSKKKVKTAQVI 885
Score = 35.1 bits (77), Expect = 0.044
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +2
Query: 506 QLRSLAFREHYAEIISEIKPDIVSGTAACEEVKSSRKFAKIL 631
+L + F+ ++E+++E+KP + S ACEEV++S F L
Sbjct: 972 RLDLVLFKMRFSEVLNELKPAMSSVMEACEEVRASEGFRTFL 1013
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 52.0 bits (119), Expect = 4e-07
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Frame = +1
Query: 1 PHGLKPKKKWEVEGPLKRANW--KTITPQKMSEKAFWVNVQEDRLASPDILSGLSQKFSS 174
P L PKK +V+GP+++ W TI P+ + ++FWV E++L S + L KF++
Sbjct: 801 PDYLPPKKVPKVDGPMRKFPWGAHTINPRDIPRESFWVGTNEEQLTSDRMFDRLRTKFAT 860
Query: 175 KPVAKK-TEDAVDKAHTLKKVRDLKVL 252
KP A T V ++ KKV+ +V+
Sbjct: 861 KPAANSGTLGGV--LNSKKKVKTAQVI 885
Score = 35.1 bits (77), Expect = 0.044
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +2
Query: 506 QLRSLAFREHYAEIISEIKPDIVSGTAACEEVKSSRKFAKIL 631
+L + F+ ++E+++E+KP + S ACEEV++S F L
Sbjct: 972 RLDLVLFKMRFSEVLNELKPAMSSVMEACEEVRASEGFRTFL 1013
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 52.0 bits (119), Expect = 4e-07
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Frame = +1
Query: 1 PHGLKPKKKWEVEGPLKRANW--KTITPQKMSEKAFWVNVQEDRLASPDILSGLSQKFSS 174
P L PKK +V+GP+++ W TI P+ + ++FWV E++L S + L KF++
Sbjct: 384 PDYLPPKKVPKVDGPMRKFPWGAHTINPRDIPRESFWVGTNEEQLTSDRMFDRLRTKFAT 443
Query: 175 KPVAKK-TEDAVDKAHTLKKVRDLKVL 252
KP A T V ++ KKV+ +V+
Sbjct: 444 KPAANSGTLGGV--LNSKKKVKTAQVI 468
Score = 35.1 bits (77), Expect = 0.044
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +2
Query: 506 QLRSLAFREHYAEIISEIKPDIVSGTAACEEVKSSRKFAKIL 631
+L + F+ ++E+++E+KP + S ACEEV++S F L
Sbjct: 555 RLDLVLFKMRFSEVLNELKPAMSSVMEACEEVRASEGFRTFL 596
>U51994-2|AAA96065.3| 1311|Caenorhabditis elegans Hypothetical
protein R03G5.3 protein.
Length = 1311
Score = 30.7 bits (66), Expect = 0.94
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -3
Query: 215 ALSTASSVFLATGLLENFCDKPLRMSGDANLSSCTLTQNAFSDIFCG 75
A+ST++ +FL L +NF P +S LS L Q + +FCG
Sbjct: 541 AVSTSTMLFLYIYLRKNFQGYPAMVSHQNRLSVAFLLQALLTFVFCG 587
>AF026206-1|AAK39306.1| 260|Caenorhabditis elegans Hypothetical
protein T28B4.2 protein.
Length = 260
Score = 30.7 bits (66), Expect = 0.94
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 110 LTQNAFSDIFCGVIVFQLARFNGPSTSHFFFGLRPC 3
L ++F ++FC V L P+ + FFF LR C
Sbjct: 63 LVTDSFFNLFCDVYEISLHYTTEPTNAEFFFSLRNC 98
>U41021-5|AAA82335.2| 652|Caenorhabditis elegans Hypothetical
protein F14D12.5 protein.
Length = 652
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Frame = -3
Query: 215 ALSTASSVFLATGLLENF-----CDKPLRMSGDANLSSCTLTQNAFSDIFCGVI--VFQL 57
A+ +S+ + TG+++ CDKP++ G +S+ T FS F GV+ + +L
Sbjct: 146 AIEIVTSLCILTGIIQAVMAIFRCDKPMKFLGAPAISAIT-----FSACFFGVVSQIPKL 200
Query: 56 ARFNGPSTSHFFFGL 12
F+ PS + +F L
Sbjct: 201 CGFSVPSRNEHWFSL 215
>AY887908-1|AAX34420.1| 652|Caenorhabditis elegans anion
transporter SULP-2 protein.
Length = 652
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Frame = -3
Query: 215 ALSTASSVFLATGLLENF-----CDKPLRMSGDANLSSCTLTQNAFSDIFCGVI--VFQL 57
A+ +S+ + TG+++ CDKP++ G +S+ T FS F GV+ + +L
Sbjct: 146 AIEIVTSLCILTGIIQAVMAIFRCDKPMKFLGAPAISAIT-----FSACFFGVVSQIPKL 200
Query: 56 ARFNGPSTSHFFFGL 12
F+ PS + +F L
Sbjct: 201 CGFSVPSRNEHWFSL 215
>AF016433-8|AAB65386.2| 333|Caenorhabditis elegans Hypothetical
protein C09H5.7 protein.
Length = 333
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = -3
Query: 170 ENFCDKPLRMSGDANLSSCTLTQNAFSDIFCGVIVFQLARFNGPSTSHFFFG 15
++F D+P+ + DA + C +SD+ + +F +ARF P +++ F G
Sbjct: 68 KSFLDQPVMLEVDAPIKVCGDVHGQYSDV---IRMFSIARF-PPHSNYIFLG 115
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform a protein.
Length = 1256
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Frame = -1
Query: 400 GGRYCMSRSSTFPVSTVVSQRSTHV----RMCEYDMCLSEPPSRIDRFWAALLPGPSGRV 233
GG S S+FP V+ QRS + C + + P R +W A P S R
Sbjct: 95 GGLRPSSSWSSFPQQVVIDQRSATLPHFPSSCVSPVSPTSPVDRNTNYWTAEEPPRSRRP 154
Query: 232 LSSE 221
+ SE
Sbjct: 155 IRSE 158
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,323,517
Number of Sequences: 27780
Number of extensions: 248951
Number of successful extensions: 891
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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