Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1465
         (661 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    25   0.55 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    25   0.55 
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           23   2.9  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   9.0  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   9.0  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   9.0  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   9.0  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +3

Query: 90  HIVMTIKN*SATRNQTVPGKT*KTI 164
           +I+ +I+  S TRNQ VP  T KT+
Sbjct: 196 NIIDSIRQNSQTRNQAVPTGTIKTL 220


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +3

Query: 90  HIVMTIKN*SATRNQTVPGKT*KTI 164
           +I+ +I+  S TRNQ VP  T KT+
Sbjct: 196 NIIDSIRQNSQTRNQAVPTGTIKTL 220


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -3

Query: 299 IQILRSNKQRDLTETKKK 246
           I ILR N Q D+  TKKK
Sbjct: 23  IIILRKNPQDDILLTKKK 40


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -3

Query: 305 TTIQILRSNKQRDLTETKKKLPETMQ*TMKSSNYFEY 195
           +T+  L   K++   E K ++PE ++      N FEY
Sbjct: 31  STLLPLFGLKEQPKIEGKVQVPEALKKIYNIQNNFEY 67


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 71  IGRFYNSYCNDNKKLISN*KSN 136
           +GR + +YC +N     N  SN
Sbjct: 304 LGRIFRAYCRENHASWVNHLSN 325


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 86  NSYCNDNKKLISN 124
           N Y N N+KLIS+
Sbjct: 381 NGYANVNRKLISS 393


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 86  NSYCNDNKKLISN 124
           N Y N N+KLIS+
Sbjct: 381 NGYANVNRKLISS 393


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,436
Number of Sequences: 336
Number of extensions: 2921
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)