Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1465
         (661 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81137-3|CAB03471.1|  338|Caenorhabditis elegans Hypothetical pr...    27   8.9  
AF068716-3|ABQ13069.1|  208|Caenorhabditis elegans Hypothetical ...    27   8.9  
AF022975-4|AAB70673.1|  214|Caenorhabditis elegans Hypothetical ...    27   8.9  

>Z81137-3|CAB03471.1|  338|Caenorhabditis elegans Hypothetical
           protein W02D9.4 protein.
          Length = 338

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
 Frame = +1

Query: 568 LFTEMLVLGL---FIGVFEPLLYNKVHCFAHN 654
           LFT +L+L L   FI V   ++Y K+ CF  N
Sbjct: 254 LFTNLLLLNLKLLFINVLSQVIYLKMQCFFPN 285


>AF068716-3|ABQ13069.1|  208|Caenorhabditis elegans Hypothetical
           protein F26D11.13 protein.
          Length = 208

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 11/42 (26%), Positives = 22/42 (52%)
 Frame = -2

Query: 591 KNQHFCK*CYKNELCSVSCIKKSNTDFMNCD*FIAMNVSTVE 466
           KN + CK CYK+   + + + +S    +    F + N+ T++
Sbjct: 90  KNFNMCKECYKDATNATNALNESAESIIQFSEFTSENLKTIQ 131


>AF022975-4|AAB70673.1|  214|Caenorhabditis elegans Hypothetical
           protein K09C6.6 protein.
          Length = 214

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -3

Query: 296 QILRSNKQRDLTETKKKLPETMQ*TMKSSNYFEYY 192
           Q+L    Q+ LT T    P+++Q     SNY  YY
Sbjct: 174 QLLGRKSQQMLTHTMSVAPKSLQLLQLCSNYSNYY 208


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,271,313
Number of Sequences: 27780
Number of extensions: 242634
Number of successful extensions: 483
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 483
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)