Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1464
(595 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 221 4e-58
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 220 5e-58
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 220 5e-58
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 220 7e-58
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 220 7e-58
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 220 7e-58
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 217 6e-57
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 217 6e-57
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 217 6e-57
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 200 7e-52
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 180 6e-46
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 169 2e-42
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 114 5e-26
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 93 1e-19
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 88 4e-18
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 68 4e-12
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 60 8e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 48 6e-06
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 46 2e-05
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 37 0.012
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 37 0.012
At5g12400.1 68418.m01458 PHD finger transcription factor, putati... 32 0.33
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 31 0.77
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 26 1.7
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 2.3
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 2.3
At5g56630.1 68418.m07070 phosphofructokinase family protein simi... 29 3.1
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 5.4
At2g22330.1 68415.m02649 cytochrome P450, putative similar to cy... 28 5.4
At5g22560.1 68418.m02635 hypothetical protein contains Pfam prof... 27 7.1
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 7.1
At4g36790.1 68417.m05219 transporter-related low similarity to s... 27 7.1
At2g25680.1 68415.m03078 expressed protein ; expression supporte... 27 7.1
At5g17960.1 68418.m02106 DC1 domain-containing protein contains ... 27 9.4
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 221 bits (539), Expect = 4e-58
Identities = 104/119 (87%), Positives = 108/119 (90%)
Frame = +2
Query: 236 GKAPPSGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 415
G+ +GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELR 97
Query: 416 VAPEEHPVLLTEAPLNPKANREKMTQIMFETSTRPPCTFAIQAVLSLYASRRTTGIVLD 592
VAPEEHPVLLTEAPLNPKANREKMTQIMFET P AIQAVLSLYAS RTTGIVLD
Sbjct: 98 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 156
Score = 71.3 bits (167), Expect = 4e-13
Identities = 31/38 (81%), Positives = 34/38 (89%)
Frame = +3
Query: 138 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 251
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRH 42
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 220 bits (538), Expect = 5e-58
Identities = 104/119 (87%), Positives = 107/119 (89%)
Frame = +2
Query: 236 GKAPPSGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 415
G+ +GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELR 97
Query: 416 VAPEEHPVLLTEAPLNPKANREKMTQIMFETSTRPPCTFAIQAVLSLYASRRTTGIVLD 592
VAPEEHPVLLTEAPLNPKANREKMTQIMFET P AIQAVLSLYAS RTTGIVLD
Sbjct: 98 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 156
Score = 71.3 bits (167), Expect = 4e-13
Identities = 31/38 (81%), Positives = 34/38 (89%)
Frame = +3
Query: 138 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 251
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRH 42
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 220 bits (538), Expect = 5e-58
Identities = 104/119 (87%), Positives = 107/119 (89%)
Frame = +2
Query: 236 GKAPPSGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 415
G+ +GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELR 97
Query: 416 VAPEEHPVLLTEAPLNPKANREKMTQIMFETSTRPPCTFAIQAVLSLYASRRTTGIVLD 592
VAPEEHPVLLTEAPLNPKANREKMTQIMFET P AIQAVLSLYAS RTTGIVLD
Sbjct: 98 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 156
Score = 71.3 bits (167), Expect = 4e-13
Identities = 31/38 (81%), Positives = 34/38 (89%)
Frame = +3
Query: 138 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 251
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRH 42
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 220 bits (537), Expect = 7e-58
Identities = 104/119 (87%), Positives = 108/119 (90%)
Frame = +2
Query: 236 GKAPPSGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 415
G+ +GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELR 97
Query: 416 VAPEEHPVLLTEAPLNPKANREKMTQIMFETSTRPPCTFAIQAVLSLYASRRTTGIVLD 592
VAPEEHPVLLTEAPLNPKANREKMTQIMFET P AIQAVLSLYAS RTTGIVLD
Sbjct: 98 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLD 156
Score = 71.3 bits (167), Expect = 4e-13
Identities = 31/38 (81%), Positives = 34/38 (89%)
Frame = +3
Query: 138 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 251
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRH 42
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 220 bits (537), Expect = 7e-58
Identities = 103/119 (86%), Positives = 107/119 (89%)
Frame = +2
Query: 236 GKAPPSGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 415
G+ +GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELR 97
Query: 416 VAPEEHPVLLTEAPLNPKANREKMTQIMFETSTRPPCTFAIQAVLSLYASRRTTGIVLD 592
VAPEEHP+LLTEAPLNPKANREKMTQIMFET P AIQAVLSLYAS RTTGIVLD
Sbjct: 98 VAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLD 156
Score = 71.3 bits (167), Expect = 4e-13
Identities = 31/38 (81%), Positives = 34/38 (89%)
Frame = +3
Query: 138 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 251
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRH 42
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 220 bits (537), Expect = 7e-58
Identities = 103/119 (86%), Positives = 107/119 (89%)
Frame = +2
Query: 236 GKAPPSGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 415
G+ +GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELR 97
Query: 416 VAPEEHPVLLTEAPLNPKANREKMTQIMFETSTRPPCTFAIQAVLSLYASRRTTGIVLD 592
VAPEEHP+LLTEAPLNPKANREKMTQIMFET P AIQAVLSLYAS RTTGIVLD
Sbjct: 98 VAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLD 156
Score = 71.3 bits (167), Expect = 4e-13
Identities = 31/38 (81%), Positives = 34/38 (89%)
Frame = +3
Query: 138 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 251
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRH 42
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 217 bits (529), Expect = 6e-57
Identities = 101/119 (84%), Positives = 106/119 (89%)
Frame = +2
Query: 236 GKAPPSGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 415
G+ GVMVGM QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELR 97
Query: 416 VAPEEHPVLLTEAPLNPKANREKMTQIMFETSTRPPCTFAIQAVLSLYASRRTTGIVLD 592
+APEEHPVLLTEAPLNPKANREKMTQIMFET P AIQAVLSLYAS RTTGIVLD
Sbjct: 98 IAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLD 156
Score = 68.9 bits (161), Expect = 2e-12
Identities = 28/38 (73%), Positives = 34/38 (89%)
Frame = +3
Query: 138 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 251
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRH 42
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 217 bits (529), Expect = 6e-57
Identities = 101/119 (84%), Positives = 106/119 (89%)
Frame = +2
Query: 236 GKAPPSGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 415
G+ GVMVGM QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELR 97
Query: 416 VAPEEHPVLLTEAPLNPKANREKMTQIMFETSTRPPCTFAIQAVLSLYASRRTTGIVLD 592
+APEEHPVLLTEAPLNPKANREKMTQIMFET P AIQAVLSLYAS RTTGIVLD
Sbjct: 98 IAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLD 156
Score = 68.9 bits (161), Expect = 2e-12
Identities = 28/38 (73%), Positives = 34/38 (89%)
Frame = +3
Query: 138 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 251
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRH 42
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 217 bits (529), Expect = 6e-57
Identities = 101/119 (84%), Positives = 106/119 (89%)
Frame = +2
Query: 236 GKAPPSGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 415
G+ GVMVGM QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELR 97
Query: 416 VAPEEHPVLLTEAPLNPKANREKMTQIMFETSTRPPCTFAIQAVLSLYASRRTTGIVLD 592
+APEEHPVLLTEAPLNPKANREKMTQIMFET P AIQAVLSLYAS RTTGIVLD
Sbjct: 98 IAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLD 156
Score = 68.9 bits (161), Expect = 2e-12
Identities = 28/38 (73%), Positives = 34/38 (89%)
Frame = +3
Query: 138 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 251
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRH 42
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 200 bits (487), Expect = 7e-52
Identities = 90/119 (75%), Positives = 103/119 (86%)
Frame = +2
Query: 236 GKAPPSGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 415
G+ GVMVGM +KD++VGDEAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR
Sbjct: 39 GRPRHRGVMVGMDEKDTFVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELR 98
Query: 416 VAPEEHPVLLTEAPLNPKANREKMTQIMFETSTRPPCTFAIQAVLSLYASRRTTGIVLD 592
+ PEEHP+LLTEAPLNPK NREKMTQIMFE+ P IQAVLSLY+S RTTGIVLD
Sbjct: 99 LEPEEHPILLTEAPLNPKVNREKMTQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLD 157
Score = 70.9 bits (166), Expect = 6e-13
Identities = 30/39 (76%), Positives = 35/39 (89%)
Frame = +3
Query: 138 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 254
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHR 44
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 180 bits (438), Expect = 6e-46
Identities = 81/111 (72%), Positives = 95/111 (85%)
Frame = +2
Query: 260 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 439
MVGM + D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 440 LLTEAPLNPKANREKMTQIMFETSTRPPCTFAIQAVLSLYASRRTTGIVLD 592
LLTEAPLNPKA+REKMTQIMFET P +QA LSL+AS RTTG VLD
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLD 111
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 169 bits (410), Expect = 2e-42
Identities = 77/109 (70%), Positives = 89/109 (81%)
Frame = +2
Query: 266 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 445
G+ +SYVG+E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHPVLL
Sbjct: 37 GLNPNESYVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLL 96
Query: 446 TEAPLNPKANREKMTQIMFETSTRPPCTFAIQAVLSLYASRRTTGIVLD 592
TEAP NPKANREKMTQIMFE+ P ++Q+VL LY+S RTTG+VLD
Sbjct: 97 TEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLD 145
Score = 52.4 bits (120), Expect = 2e-07
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +3
Query: 153 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 248
+V D G GM +AGFAGD+AP+ VFP +VGRPR
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPR 35
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 114 bits (274), Expect = 5e-26
Identities = 52/105 (49%), Positives = 66/105 (62%)
Frame = +2
Query: 278 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 457
KD VG+ R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ P
Sbjct: 51 KDIVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPP 110
Query: 458 LNPKANREKMTQIMFETSTRPPCTFAIQAVLSLYASRRTTGIVLD 592
LNP NREKM + MFE IQAVL+LYA TG+V+D
Sbjct: 111 LNPSKNREKMIETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVID 155
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +3
Query: 153 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 245
+V DNG+G K GFAG++ P +VFP +VGRP
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRP 37
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 93.5 bits (222), Expect = 1e-19
Identities = 52/112 (46%), Positives = 67/112 (59%), Gaps = 8/112 (7%)
Frame = +2
Query: 281 DSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 451
D Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LLTE
Sbjct: 67 DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTE 126
Query: 452 APLNPKANREKMTQIMFETSTRPPCTFAIQAVLSLYASRRT-----TGIVLD 592
+PL P +RE +I+FET P A+ +VL+L A T TG+V+D
Sbjct: 127 SPLTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVD 178
Score = 35.9 bits (79), Expect = 0.020
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 150 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 236
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 88.2 bits (209), Expect = 4e-18
Identities = 43/103 (41%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Frame = +2
Query: 287 YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 463
YVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN
Sbjct: 76 YVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLN 135
Query: 464 PKANREKMTQIMFETSTRPPCTFAIQAVLSLYASRRTTGIVLD 592
+ REK ++MFE P A VL+ +A+ R T +V+D
Sbjct: 136 TQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVD 178
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +3
Query: 138 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 239
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 68.1 bits (159), Expect = 4e-12
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +2
Query: 272 GQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 448
G++ Y G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 449 EAPLNPKANREK 484
E PLN + REK
Sbjct: 125 EPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 8e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +3
Query: 138 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 239
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 60.5 bits (140), Expect = 8e-10
Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = +2
Query: 338 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETST 514
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFET
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 515 RPPCTFAIQAVLSLYASRRTTGIVLD 592
+ QAVLSLYA R +G +D
Sbjct: 117 VSGFYASEQAVLSLYAVGRISGCTVD 142
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 150 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 242
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 47.6 bits (108), Expect = 6e-06
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = +2
Query: 329 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 508
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 509 STRPPCTFA-IQAVLSLY-ASRRTTGIV 586
A Q+++ LY ASR+ I+
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASRQPDSIL 148
Score = 32.7 bits (71), Expect = 0.19
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 153 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 245
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +2
Query: 338 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETST 514
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 515 RPPCTFAIQAVLSLYASRRTTGI 583
P F + A S Y + GI
Sbjct: 145 VPAVAFGVDAAFS-YKYNQLHGI 166
Score = 44.4 bits (100), Expect = 6e-05
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +3
Query: 153 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQA 257
+V+DNG+ + G+AG+ PR VF +IV RPRH+A
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKA 56
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 36.7 bits (81), Expect = 0.012
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 10/76 (13%)
Frame = +2
Query: 395 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFET--STRPPCTFAI-QA 544
T + ++V P P++++ PL + KA+R ++ +F P A+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 545 VLSLYASRRTTGIVLD 592
VL+LYA+RRT+GIV++
Sbjct: 241 VLALYAARRTSGIVVN 256
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 36.7 bits (81), Expect = 0.012
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 10/76 (13%)
Frame = +2
Query: 395 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFET--STRPPCTFAI-QA 544
T + ++V P P++++ PL + KA+R ++ +F P A+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 545 VLSLYASRRTTGIVLD 592
VL+LYA+RRT+GIV++
Sbjct: 241 VLALYAARRTSGIVVN 256
>At5g12400.1 68418.m01458 PHD finger transcription factor, putative
similarity to predicted proteins, Arabidopsis thaliana
Length = 1595
Score = 31.9 bits (69), Expect = 0.33
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = -2
Query: 564 DAYSESTAWMANVHGGRVDVSNMIWVIFSLLALGLRGASVSR-TGCSSGATRSSL*KV*C 388
DA+ E+ W + D I +F++ LRG S S S S L + C
Sbjct: 938 DAWKENCGWCHSCKNSSEDAGTEINCLFNMSLGALRGLSESEVANIQSFEKNSHLLAIIC 997
Query: 387 QIFSMSSQL 361
QI S+ S+L
Sbjct: 998 QILSLESRL 1006
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 30.7 bits (66), Expect = 0.77
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = -1
Query: 388 PNLLHVIPVSDDSVFDGVFEGQDT--SFALCLISYIRVLLSHTDHHA*WRGLPTIEGNTA 215
P L V+ ++ D + + + + YI + T RGL +G T+
Sbjct: 249 PYLTDVMILTPGQTVDALLTADQAIGKYYMATLPYISAIGIPTPDIKPTRGLIVYQGATS 308
Query: 214 RGASSPAKPALHIPEPLSTTNAATSS 137
+SSPA+P + +P +ST + TS+
Sbjct: 309 --SSSPAEPLMPVPNDMSTAHRFTSN 332
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 26.2 bits (55), Expect(2) = 1.7
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -1
Query: 250 WRGLPTIEGNTARGASSPAKPA--LHIPEPL 164
WR + T G + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
Score = 21.8 bits (44), Expect(2) = 1.7
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -1
Query: 439 DGVFLGGDTQLIVEGMMPNLLHVIPVS 359
DGV +GG + + E ++ ++ +P+S
Sbjct: 17 DGVGVGGGLESLPEDIIADIFSRLPIS 43
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +2
Query: 296 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 475
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 476 REK 484
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +2
Query: 296 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 475
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 476 REK 484
REK
Sbjct: 225 REK 227
>At5g56630.1 68418.m07070 phosphofructokinase family protein similar
to phosphofructokinase [Amycolatopsis methanolica]
GI:17432243; contains Pfam profile PF00365:
Phosphofructokinase
Length = 485
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 323 GYLFCSVPHLLHKSPSVPYRPSRLMAGPSH 234
GY+ VPHL+ P +P P+ L P++
Sbjct: 17 GYILQDVPHLIDYLPDLPTYPNPLQDNPAY 46
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -2
Query: 384 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 295
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At2g22330.1 68415.m02649 cytochrome P450, putative similar to
cytochrome P450 79B2 (SP:O81346) [Arabidopsis thaliana]
Length = 543
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -1
Query: 376 HVIPVSDDSVFDGVFEGQDTSFALCLISYIRVLLSH 269
HVIPV+ + +F+ QD FA ++Y + +LS+
Sbjct: 104 HVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSN 139
>At5g22560.1 68418.m02635 hypothetical protein contains Pfam profile
PF03140: Plant protein of unknown function
Length = 517
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -3
Query: 305 VPHLLHKSPSVPYRPSRLMAGP-SHDRGK 222
+PH L +S Y+P + GP HD GK
Sbjct: 52 IPHTLVQSNDTAYKPKIVSIGPYHHDHGK 80
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 250 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 128
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At4g36790.1 68417.m05219 transporter-related low similarity to
spinster membrane proteins from [Drosophila
melanogaster] GI:12003976, GI:12003972, GI:12003974,
GI:12003970; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 489
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = -1
Query: 346 FDGVFEGQDTSFALCLISYIRVLLSHTDHHA*WRGLPTIEGNTARGASSPAKPAL 182
FD FEG +SFA L+ + L D RG+ ++G++ R A + +K L
Sbjct: 400 FDRAFEGSFSSFAAPLVGILSEKLFGYDS----RGIDPLKGSSVREADALSKGLL 450
>At2g25680.1 68415.m03078 expressed protein ; expression supported
by MPSS
Length = 456
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -1
Query: 436 GVFLGGDTQLI-VEGMMPNLLHVIPVSDDSVFDGVFEGQDTSFALCLISYIR 284
G+ GG ++ + G+M + ++IP+S V G+ Q +FA+ + YIR
Sbjct: 114 GICTGGILFVLGISGLMQLVFNIIPLS---VVRGIQLSQGLAFAMSAVKYIR 162
>At5g17960.1 68418.m02106 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 599
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -2
Query: 435 GCSSGATRSSL*-KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPT*ESF 277
GC G T++ L C+ +S+ + TIP + Y + PL LC T + +
Sbjct: 454 GCKRGLTKNRLQCSTLCE-YSICYECATIPSELHYKYDKHPLTLCYGEDTDDKY 506
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,515,167
Number of Sequences: 28952
Number of extensions: 329782
Number of successful extensions: 1000
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 996
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1180950720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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