Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1463
         (606 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.5  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   3.5  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   6.1  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   8.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 12/44 (27%), Positives = 17/44 (38%)
 Frame = -3

Query: 397  VLGRSIDGQSPHVVKSRVKWQTGAHPQKHVCAEVITRCPEVIFV 266
            +LGR  D   P     +     G  PQ+ V    +  C   +FV
Sbjct: 2200 ILGRDNDKTKPKPTTMKPTTTIGYEPQEPVLPAEVVPCQGRLFV 2243


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 213 ETKEKADSITTYLTMQAITNMTSGH 287
           ETK  AD + T+L+ Q I + TS H
Sbjct: 417 ETKRNADFLATFLSEQNIQS-TSIH 440


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 565 DFICEQTRCYYYNY 606
           DF+C  T  Y+ NY
Sbjct: 145 DFLCRHTVEYFQNY 158


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +2

Query: 320 WMSTGLPFNATFNYMRRLPIDAPAQH 397
           W+ TGL  +A   +  R  I  PA H
Sbjct: 110 WLGTGLLTSAGPKWQNRRKILTPAFH 135


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,654
Number of Sequences: 336
Number of extensions: 3144
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)