Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1463
         (606 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ973593-1|CAJ00537.1|  170|Homo sapiens polyglutamine binding p...    32   1.8  
AB041836-1|BAB16709.1|  170|Homo sapiens PQBP-1d protein.              32   1.8  
AB041832-2|BAB16703.1|  170|Homo sapiens PQBP1-1d protein.             32   1.8  
BC044640-1|AAH44640.1|  579|Homo sapiens phosphatidylinositol gl...    30   7.3  
AK022830-1|BAB14263.1|  579|Homo sapiens protein ( Homo sapiens ...    30   7.3  

>AJ973593-1|CAJ00537.1|  170|Homo sapiens polyglutamine binding
           protein variant 1 protein.
          Length = 170

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = +2

Query: 296 NLGTDMFLWMSTGLPFNATFNYMRRL-PIDAPAQHADDSMDPLDVPQGSTAPQRTARHGR 472
           N  TD+  W+S   P +      ++L   +A     D+ +DP+D    S AP+ T   G 
Sbjct: 67  NADTDLVSWLSPHDPNSVVTKSAKKLRSSNAAVSRKDEELDPMDPSSYSDAPRGTWSTGL 126

Query: 473 YSRTE 487
             R E
Sbjct: 127 PKRNE 131


>AB041836-1|BAB16709.1|  170|Homo sapiens PQBP-1d protein.
          Length = 170

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = +2

Query: 296 NLGTDMFLWMSTGLPFNATFNYMRRL-PIDAPAQHADDSMDPLDVPQGSTAPQRTARHGR 472
           N  TD+  W+S   P +      ++L   +A     D+ +DP+D    S AP+ T   G 
Sbjct: 67  NADTDLVSWLSPHDPNSVVTKSAKKLRSSNAAVSRKDEELDPMDPSSYSDAPRGTWSTGL 126

Query: 473 YSRTE 487
             R E
Sbjct: 127 PKRNE 131


>AB041832-2|BAB16703.1|  170|Homo sapiens PQBP1-1d protein.
          Length = 170

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = +2

Query: 296 NLGTDMFLWMSTGLPFNATFNYMRRL-PIDAPAQHADDSMDPLDVPQGSTAPQRTARHGR 472
           N  TD+  W+S   P +      ++L   +A     D+ +DP+D    S AP+ T   G 
Sbjct: 67  NADTDLVSWLSPHDPNSVVTKSAKKLRSSNAAVSRKDEELDPMDPSSYSDAPRGTWSTGL 126

Query: 473 YSRTE 487
             R E
Sbjct: 127 PKRNE 131


>BC044640-1|AAH44640.1|  579|Homo sapiens phosphatidylinositol
           glycan anchor biosynthesis, class Z protein.
          Length = 579

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +2

Query: 383 APAQHADDSMDPLDVPQGSTAPQRTARHGRYSRTEHVMTNG 505
           +PA   +  + P++    +  PQ  ARHG ++R  H+  NG
Sbjct: 282 SPATSRNLVLTPVNFLHYNLNPQNLARHGTHARLTHLAVNG 322


>AK022830-1|BAB14263.1|  579|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12768 fis, clone NT2RP2001576, weakly similar to
           HYPOTHETICAL 62.2 KD PROTEIN C4G8.12C IN CHROMOSOME I.
           ).
          Length = 579

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +2

Query: 383 APAQHADDSMDPLDVPQGSTAPQRTARHGRYSRTEHVMTNG 505
           +PA   +  + P++    +  PQ  ARHG ++R  H+  NG
Sbjct: 282 SPATSRNLVLTPVNFLHYNLNPQNLARHGTHARLTHLAVNG 322


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,199,638
Number of Sequences: 237096
Number of extensions: 2169280
Number of successful extensions: 8729
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8728
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)