BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1463
(606 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 27 0.19
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 26 0.25
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 26 0.25
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 26 0.25
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 26 0.25
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 26 0.25
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 26 0.25
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 26 0.25
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 26 0.25
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 5.4
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 5.4
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 21 7.1
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 7.1
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 21 7.1
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 21 7.1
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 9.4
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 9.4
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 9.4
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 9.4
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 9.4
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 9.4
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 9.4
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 9.4
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 9.4
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 9.4
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 9.4
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 26.6 bits (56), Expect = 0.19
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +2
Query: 224 EGRFDNDLSNNAGYNKYDFWTSGNNLGTDMFLWMSTGLPFNATFNYMRRLPIDAP 388
E + + LSNN Y+ Y+ + + NN L+ + NY+ ++PI P
Sbjct: 78 EPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYN--------INYIEQIPIPVP 124
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 26.2 bits (55), Expect = 0.25
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +2
Query: 149 RAQLFPVLSVLQIIRSSTGIVRDEGEGRFDNDLSNNAGYNKYDFWT 286
++ L P L+ Q +++TG+ R DN +N+ Y+ ++ T
Sbjct: 337 KSTLTPKLARKQFQKNTTGLERSRSWSSLDNTNTNDQDYSSQNYLT 382
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.2 bits (55), Expect = 0.25
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +2
Query: 224 EGRFDNDLSNNAGYNKYDFWTSGNNLGTDMFLWMSTGLPFNATFNYMRRLPIDAP 388
E + + LSNN Y+ Y+ + + NN L+ + NY+ ++P+ P
Sbjct: 78 EPKIVSSLSNNYNYSNYNNYNNNNNYNNYKKLYYN--------INYIEQIPVPVP 124
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.2 bits (55), Expect = 0.25
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +2
Query: 224 EGRFDNDLSNNAGYNKYDFWTSGNNLGTDMFLWMSTGLPFNATFNYMRRLPIDAP 388
E + + LSNN Y+ Y+ + + NN L+ + NY+ ++P+ P
Sbjct: 78 EPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYN--------INYIEQIPVPVP 124
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.2 bits (55), Expect = 0.25
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +2
Query: 224 EGRFDNDLSNNAGYNKYDFWTSGNNLGTDMFLWMSTGLPFNATFNYMRRLPIDAP 388
E + + LSNN Y+ Y+ + + NN L+ + NY+ ++P+ P
Sbjct: 78 EPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYN--------INYIEQIPVPVP 124
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.2 bits (55), Expect = 0.25
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +2
Query: 224 EGRFDNDLSNNAGYNKYDFWTSGNNLGTDMFLWMSTGLPFNATFNYMRRLPIDAP 388
E + + LSNN Y+ Y+ + + NN L+ + NY+ ++P+ P
Sbjct: 78 EPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYN--------INYIEQIPVPVP 124
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.2 bits (55), Expect = 0.25
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +2
Query: 224 EGRFDNDLSNNAGYNKYDFWTSGNNLGTDMFLWMSTGLPFNATFNYMRRLPIDAP 388
E + + LSNN Y+ Y+ + + NN L+ + NY+ ++P+ P
Sbjct: 78 EPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYN--------INYIEQIPVPVP 124
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.2 bits (55), Expect = 0.25
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +2
Query: 224 EGRFDNDLSNNAGYNKYDFWTSGNNLGTDMFLWMSTGLPFNATFNYMRRLPIDAP 388
E + + LSNN Y+ Y+ + + NN L+ + NY+ ++P+ P
Sbjct: 78 EPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYN--------INYIEQIPVPVP 124
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.2 bits (55), Expect = 0.25
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +2
Query: 224 EGRFDNDLSNNAGYNKYDFWTSGNNLGTDMFLWMSTGLPFNATFNYMRRLPIDAP 388
E + + LSNN Y+ Y+ + + NN L+ + NY+ ++P+ P
Sbjct: 78 EPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYN--------INYIEQIPVPVP 124
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.8 bits (44), Expect = 5.4
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = +3
Query: 117 YFISRMNPYSPELNYF 164
Y++ + P P+LNY+
Sbjct: 182 YYLHQFAPEQPDLNYY 197
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.8 bits (44), Expect = 5.4
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = +3
Query: 117 YFISRMNPYSPELNYF 164
Y++ + P P+LNY+
Sbjct: 182 YYLHQFAPEQPDLNYY 197
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 21.4 bits (43), Expect = 7.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 382 IDGQSPHVVKSRVKWQTGA 326
I+ S H K R++W TGA
Sbjct: 134 IESFSYHKQKLRLRWGTGA 152
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.4 bits (43), Expect = 7.1
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +2
Query: 224 EGRFDNDLSNNAGYNKYDFWTSGNNLGTDMF 316
E + + LSNN YN ++ + NN ++
Sbjct: 311 ERKIISSLSNNYNYNNNNYKYNYNNYNKKLY 341
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.4 bits (43), Expect = 7.1
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 342 NGRPVLIHKNMSVPRLLPDVQ 280
NGR I + M+ RLLP V+
Sbjct: 28 NGREDQIPREMNTERLLPYVE 48
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.4 bits (43), Expect = 7.1
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 342 NGRPVLIHKNMSVPRLLPDVQ 280
NGR I + M+ RLLP V+
Sbjct: 28 NGREDQIPREMNTERLLPYVE 48
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 224 EGRFDNDLSNNAGYNKYD 277
E + + LSNN YN Y+
Sbjct: 78 EPKIISSLSNNYNYNNYN 95
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 224 EGRFDNDLSNNAGYNKYD 277
E + + LSNN YN Y+
Sbjct: 78 EPKIISSLSNNYNYNNYN 95
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 224 EGRFDNDLSNNAGYNKYD 277
E + + LSNN YN Y+
Sbjct: 78 EPKIISSLSNNYNYNNYN 95
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 224 EGRFDNDLSNNAGYNKYD 277
E + + LSNN YN Y+
Sbjct: 78 EPKIISSLSNNYNYNNYN 95
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 224 EGRFDNDLSNNAGYNKYD 277
E + + LSNN YN Y+
Sbjct: 311 EPKIISSLSNNYNYNNYN 328
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 224 EGRFDNDLSNNAGYNKYD 277
E + + LSNN YN Y+
Sbjct: 311 EPKIISSLSNNYNYNNYN 328
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 224 EGRFDNDLSNNAGYNKYD 277
E + + LSNN YN Y+
Sbjct: 311 EPKIISSLSNNYNYNNYN 328
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 224 EGRFDNDLSNNAGYNKYD 277
E + + LSNN YN Y+
Sbjct: 311 EPKIISSLSNNYNYNNYN 328
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 224 EGRFDNDLSNNAGYNKYD 277
E + + LSNN YN Y+
Sbjct: 311 EPKIISSLSNNYNYNNYN 328
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 224 EGRFDNDLSNNAGYNKYD 277
E + + LSNN YN Y+
Sbjct: 300 EPKIISSLSNNYNYNNYN 317
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 329 TGLPFNATFNYMR 367
TGLPF TFN ++
Sbjct: 932 TGLPFVYTFNVIK 944
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,587
Number of Sequences: 438
Number of extensions: 3934
Number of successful extensions: 27
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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