Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1461
         (637 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.30 
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    23   1.6  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    22   3.7  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   3.7  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   3.7  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   6.5  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   6.5  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   8.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 13/50 (26%), Positives = 23/50 (46%)
 Frame = -2

Query: 591  PEELVCRHTPRSALATILG*SDASSQGVRHPRSSTSWSPPAGGSTPSWGP 442
            PE+  C  T    +  I+  +   +Q      ++TSW+P +  + P W P
Sbjct: 1323 PEKATCDGTSNVNVVDIVT-TAKPAQSTTSVSTTTSWNPGSTTNYPEWQP 1371



 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +2

Query: 164  WRSTTGTSRWLRTTPCLEHPNTR 232
            W S+T TS W  TT       TR
Sbjct: 1042 WWSSTTTSPWWTTTTTRRTTTTR 1064


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -3

Query: 494 LPLLGVHQLAVVLPHGALAGDHADQTRK 411
           +P LG+H L V   H ++AG  A   RK
Sbjct: 41  VPGLGLHGLPVDSLHSSMAGYPAGNQRK 68


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +3

Query: 462 YRQLVDSKKWKN 497
           Y+Q V+++KW+N
Sbjct: 174 YKQCVENRKWQN 185


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +3

Query: 462 YRQLVDSKKWKN 497
           Y+Q V+++KW+N
Sbjct: 407 YKQCVENRKWQN 418


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +3

Query: 462 YRQLVDSKKWKN 497
           Y+Q V+++KW+N
Sbjct: 407 YKQCVENRKWQN 418


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 475 WTPRSGRTWMSYTLARRVRL 534
           +TP+  R  + Y+L R VRL
Sbjct: 282 YTPQDIRDLLQYSLVRGVRL 301


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
 Frame = -1

Query: 574 QAHSEVSTSHHSWVVGRV--EPGCT 506
           QA+  +ST H  W+ G    E  CT
Sbjct: 89  QANPPISTEHCDWLYGIFGHETSCT 113


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = +2

Query: 152 H*RCWRSTTGTSRWLR 199
           H  CW ST    +W++
Sbjct: 368 HLGCWNSTPSIVQWMQ 383


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,774
Number of Sequences: 336
Number of extensions: 3605
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)