Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1460
(642 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_41405| Best HMM Match : RVT_1 (HMM E-Value=0) 43 2e-04
SB_47174| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_43755| Best HMM Match : rve (HMM E-Value=5.6e-11) 39 0.004
SB_34095| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_154| Best HMM Match : RVT_1 (HMM E-Value=0.00044) 35 0.065
SB_45779| Best HMM Match : RVT_1 (HMM E-Value=0) 34 0.11
SB_53217| Best HMM Match : RVT_1 (HMM E-Value=3.1e-13) 33 0.26
SB_12433| Best HMM Match : RVT_1 (HMM E-Value=0.00019) 33 0.26
SB_58478| Best HMM Match : RVT_1 (HMM E-Value=1.3e-29) 32 0.34
SB_53979| Best HMM Match : TetR_C (HMM E-Value=5.3) 32 0.34
SB_25425| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.34
SB_46950| Best HMM Match : zf-CCHC (HMM E-Value=0.0015) 32 0.34
SB_39617| Best HMM Match : RVT_1 (HMM E-Value=4.7e-38) 32 0.34
SB_29623| Best HMM Match : GM_CSF (HMM E-Value=5) 32 0.34
SB_23788| Best HMM Match : RVT_1 (HMM E-Value=4.7e-38) 32 0.34
SB_19517| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.34
SB_9562| Best HMM Match : TetR_C (HMM E-Value=4) 32 0.34
SB_1797| Best HMM Match : rve (HMM E-Value=8.5e-35) 32 0.34
SB_37892| Best HMM Match : rve (HMM E-Value=2.1e-16) 32 0.46
SB_15453| Best HMM Match : Prenyltrans (HMM E-Value=0) 32 0.46
SB_49245| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.46
SB_49429| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.60
SB_18046| Best HMM Match : RVT_1 (HMM E-Value=0.34) 31 0.60
SB_3438| Best HMM Match : RVT_1 (HMM E-Value=1.3e-30) 31 0.60
SB_14434| Best HMM Match : RVT_1 (HMM E-Value=8e-34) 31 0.80
SB_28811| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_51142| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39) 31 1.1
SB_50156| Best HMM Match : RVT_1 (HMM E-Value=7.2e-37) 31 1.1
SB_49539| Best HMM Match : RVT_1 (HMM E-Value=1.8e-39) 31 1.1
SB_48126| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39) 31 1.1
SB_47416| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_44967| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_41330| Best HMM Match : Destabilase (HMM E-Value=5) 31 1.1
SB_39101| Best HMM Match : RVT_1 (HMM E-Value=2.4e-38) 31 1.1
SB_35577| Best HMM Match : RVP (HMM E-Value=3e-05) 31 1.1
SB_27768| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39) 31 1.1
SB_25140| Best HMM Match : RVT_1 (HMM E-Value=7.8e-38) 31 1.1
SB_21103| Best HMM Match : RVT_1 (HMM E-Value=7.8e-38) 31 1.1
SB_15135| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 31 1.1
SB_11711| Best HMM Match : 7tm_1 (HMM E-Value=8.5e-10) 31 1.1
SB_9368| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_46540| Best HMM Match : RVT_1 (HMM E-Value=4.8e-27) 31 1.1
SB_45108| Best HMM Match : RVT_1 (HMM E-Value=4.9e-37) 31 1.1
SB_44757| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 31 1.1
SB_15324| Best HMM Match : RVP (HMM E-Value=8.1e-05) 31 1.1
SB_57814| Best HMM Match : RVT_thumb (HMM E-Value=5.6) 30 1.4
SB_56941| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_56859| Best HMM Match : rve (HMM E-Value=4.8e-35) 30 1.4
SB_56338| Best HMM Match : DUF970 (HMM E-Value=1.9) 30 1.4
SB_52192| Best HMM Match : Fibrinogen_C (HMM E-Value=0.077) 30 1.4
SB_42569| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32) 30 1.4
SB_40877| Best HMM Match : RVT_1 (HMM E-Value=2.9e-28) 30 1.4
SB_36217| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_24578| Best HMM Match : rve (HMM E-Value=4.8e-35) 30 1.4
SB_16279| Best HMM Match : DNA_pol_viral_C (HMM E-Value=3.6) 30 1.4
SB_13231| Best HMM Match : DNA_pol_viral_C (HMM E-Value=2.1) 30 1.4
SB_11123| Best HMM Match : RVT_1 (HMM E-Value=3.4e-27) 30 1.4
SB_9298| Best HMM Match : rve (HMM E-Value=4.8e-35) 30 1.4
SB_8612| Best HMM Match : RVT_1 (HMM E-Value=2.1e-32) 30 1.4
SB_7050| Best HMM Match : RVT_thumb (HMM E-Value=5.6) 30 1.4
SB_3512| Best HMM Match : rve (HMM E-Value=4.7e-35) 30 1.4
SB_1340| Best HMM Match : rve (HMM E-Value=3.1e-14) 30 1.4
SB_697| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32) 30 1.4
SB_59245| Best HMM Match : SspH (HMM E-Value=5.7) 30 1.4
SB_55673| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32) 30 1.4
SB_54590| Best HMM Match : rve (HMM E-Value=4.8e-35) 30 1.4
SB_53290| Best HMM Match : RVT_1 (HMM E-Value=3.8e-31) 30 1.4
SB_53100| Best HMM Match : HMD (HMM E-Value=2.8) 30 1.4
SB_45153| Best HMM Match : rve (HMM E-Value=0) 30 1.4
SB_45147| Best HMM Match : zf-CCHC (HMM E-Value=0.0051) 30 1.4
SB_39667| Best HMM Match : rve (HMM E-Value=9e-32) 30 1.4
SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_27987| Best HMM Match : RVT_1 (HMM E-Value=4.8e-32) 30 1.4
SB_24280| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_23220| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32) 30 1.4
SB_17897| Best HMM Match : Ldl_recept_a (HMM E-Value=1.2e-14) 30 1.4
SB_14088| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32) 30 1.4
SB_12609| Best HMM Match : rve (HMM E-Value=4.8e-35) 30 1.4
SB_12601| Best HMM Match : rve (HMM E-Value=5e-29) 30 1.4
SB_9355| Best HMM Match : rve (HMM E-Value=4.8e-35) 30 1.4
SB_4461| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_3870| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_58082| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_8440| Best HMM Match : RVT_1 (HMM E-Value=4.3e-18) 30 1.8
SB_21429| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_8975| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_27499| Best HMM Match : RVT_1 (HMM E-Value=9.2e-39) 29 2.4
SB_21496| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_15440| Best HMM Match : ig (HMM E-Value=5.5e-06) 29 2.4
SB_7810| Best HMM Match : RVT_1 (HMM E-Value=2.8026e-45) 29 2.4
SB_2074| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_47769| Best HMM Match : zf-CCHC (HMM E-Value=0.00034) 29 3.2
SB_43121| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32) 29 3.2
SB_42447| Best HMM Match : RVT_1 (HMM E-Value=1.5e-32) 29 3.2
SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_33029| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 3.2
SB_24490| Best HMM Match : RVT_1 (HMM E-Value=1e-32) 29 3.2
SB_20314| Best HMM Match : RVT_1 (HMM E-Value=1e-32) 29 3.2
SB_6030| Best HMM Match : rve (HMM E-Value=8.7e-30) 29 3.2
SB_4267| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_411| Best HMM Match : RVT_1 (HMM E-Value=2.5e-29) 29 3.2
SB_45140| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32) 29 3.2
SB_39931| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32) 29 3.2
SB_39271| Best HMM Match : Secretin_N (HMM E-Value=2.4) 29 3.2
SB_38698| Best HMM Match : MiaE (HMM E-Value=5.8) 29 3.2
SB_29480| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32) 29 3.2
SB_28069| Best HMM Match : RVT_1 (HMM E-Value=1.8e-28) 29 3.2
SB_22521| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32) 29 3.2
SB_18645| Best HMM Match : RVT_1 (HMM E-Value=0.0003) 29 3.2
SB_16795| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_13297| Best HMM Match : RnaseH (HMM E-Value=0.37) 29 3.2
SB_12900| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_9508| Best HMM Match : Secretin_N (HMM E-Value=1.8) 29 3.2
SB_55897| Best HMM Match : RVT_1 (HMM E-Value=5.3e-37) 29 4.2
SB_39090| Best HMM Match : zf-piccolo (HMM E-Value=0.81) 29 4.2
SB_16776| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_2440| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_663| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_57833| Best HMM Match : RnaseH (HMM E-Value=0.18) 29 4.2
SB_58015| Best HMM Match : rve (HMM E-Value=0.00087) 28 5.6
SB_51755| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_48993| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_25071| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_20246| Best HMM Match : RVT_1 (HMM E-Value=1.4e-30) 28 5.6
SB_53144| Best HMM Match : RVT_thumb (HMM E-Value=0.14) 28 5.6
SB_46697| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_35785| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_31551| Best HMM Match : RVT_1 (HMM E-Value=5.3e-37) 28 5.6
SB_26552| Best HMM Match : MannoseP_isomer (HMM E-Value=7.4) 28 5.6
SB_22028| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_18117| Best HMM Match : rve (HMM E-Value=1.7e-29) 28 5.6
SB_14854| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_38788| Best HMM Match : rve (HMM E-Value=4e-06) 28 7.4
SB_3606| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_40710| Best HMM Match : RVT_1 (HMM E-Value=1.7e-25) 28 7.4
SB_27585| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_14634| Best HMM Match : ATP-synt_E (HMM E-Value=2.6) 28 7.4
SB_52907| Best HMM Match : RVT_1 (HMM E-Value=2.4e-17) 27 9.8
SB_52035| Best HMM Match : RVT_1 (HMM E-Value=0.067) 27 9.8
SB_44431| Best HMM Match : Coat_F (HMM E-Value=1.3) 27 9.8
SB_31270| Best HMM Match : rve (HMM E-Value=0.0043) 27 9.8
SB_44255| Best HMM Match : RVT_1 (HMM E-Value=7.6e-29) 27 9.8
SB_29817| Best HMM Match : Keratin_B2 (HMM E-Value=6.3) 27 9.8
SB_130| Best HMM Match : rve (HMM E-Value=0.0043) 27 9.8
>SB_41405| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 2639
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/39 (43%), Positives = 28/39 (71%)
Frame = +1
Query: 391 RTNEDKICAVKKFPLPKTQKEIKSFLDLIVYYRKLIQDF 507
+ N KI AV+++P PK ++++SFL L YYR+ ++DF
Sbjct: 874 KPNPAKIKAVQEYPRPKNVRDVRSFLGLANYYRRFVKDF 912
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = +3
Query: 276 ITAPSTYLRLMDSVKRGLN--NVLTYLDDVII 365
+ +PS + RLM V RGLN + L YLDD+I+
Sbjct: 792 VGSPSCFSRLMSHVLRGLNWKSCLVYLDDIIV 823
>SB_47174| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1198
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +1
Query: 406 KICAVKKFPLPKTQKEIKSFLDLIVYYRKLIQDF 507
K+ AV ++P P+ KE++ FL +I +YR+ I+DF
Sbjct: 439 KVKAVSEYPPPRNLKELRCFLGMINFYRRFIKDF 472
>SB_43755| Best HMM Match : rve (HMM E-Value=5.6e-11)
Length = 461
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/38 (44%), Positives = 27/38 (71%)
Frame = +1
Query: 394 TNEDKICAVKKFPLPKTQKEIKSFLDLIVYYRKLIQDF 507
T+ K+ AV +P+PK ++E++SFL L YYRK ++ F
Sbjct: 5 TDLAKLEAVISWPVPKKKRELQSFLGLCTYYRKYVKMF 42
>SB_34095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 465
Score = 37.5 bits (83), Expect = 0.009
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 394 TNEDKICAVKKFPLPKTQKEIKSFLDLIVYYRKLIQDF 507
T+ +K AV++ P+P T + ++SFL YYR+ + F
Sbjct: 89 TDPEKTAAVRELPVPTTVRNLRSFLGFASYYRRFVPKF 126
>SB_154| Best HMM Match : RVT_1 (HMM E-Value=0.00044)
Length = 1170
Score = 34.7 bits (76), Expect = 0.065
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 394 TNEDKICAVKKFPLPKTQKEIKSFLDLIVYYRKLIQDF 507
T+ +K AV P+P T +++SFL YYR+ + F
Sbjct: 884 TDPEKTKAVSALPVPSTVHDLRSFLGFASYYRRFVPKF 921
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Frame = +3
Query: 282 APSTYLRLMDSVKRG--LNNVLTYLDDVII 365
AP+T+ RLM V R L +++ YLDD+I+
Sbjct: 803 APATFQRLMQGVFREELLQSMMVYLDDIIV 832
>SB_45779| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 946
Score = 33.9 bits (74), Expect = 0.11
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 427 FPLPKTQKEIKSFLDLIVYYRKLIQDF 507
+P P+T KE++SFL YYR+ + +F
Sbjct: 244 WPTPRTLKELRSFLGFASYYRRFVPEF 270
>SB_53217| Best HMM Match : RVT_1 (HMM E-Value=3.1e-13)
Length = 436
Score = 32.7 bits (71), Expect = 0.26
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +3
Query: 282 APSTYLRLMDSVKRGLNNVLTYLDDVII 365
AP + MD++ +G+N V+ Y+DD++I
Sbjct: 237 APGLFQSTMDTILQGINGVVCYIDDILI 264
>SB_12433| Best HMM Match : RVT_1 (HMM E-Value=0.00019)
Length = 1234
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + R MD V +G+ V YLDD+II
Sbjct: 974 SAPAIWQRAMDQVLQGIPRVQCYLDDIII 1002
>SB_58478| Best HMM Match : RVT_1 (HMM E-Value=1.3e-29)
Length = 169
Score = 32.3 bits (70), Expect = 0.34
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP Y ++M + GL VLTY DDV+I
Sbjct: 92 SAPEAYQKMMSIICGGLPCVLTYFDDVVI 120
>SB_53979| Best HMM Match : TetR_C (HMM E-Value=5.3)
Length = 327
Score = 32.3 bits (70), Expect = 0.34
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +1
Query: 403 DKICAVKKFPLPKTQKEIKSFLDLIVYYRKLI 498
DK+ A+K P P+ ++++FL L+ YY+K +
Sbjct: 75 DKVEAIKTAPSPQDVTQLRAFLGLVNYYQKFL 106
>SB_25425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 32.3 bits (70), Expect = 0.34
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +1
Query: 403 DKICAVKKFPLPKTQKEIKSFLDLIVYYRKLI 498
DK+ A+K P P+ ++++FL L+ YY+K +
Sbjct: 87 DKVEAIKTAPSPQDVTQLRAFLGLVNYYQKFL 118
>SB_46950| Best HMM Match : zf-CCHC (HMM E-Value=0.0015)
Length = 797
Score = 32.3 bits (70), Expect = 0.34
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +1
Query: 403 DKICAVKKFPLPKTQKEIKSFLDLIVYYRKLI 498
DK+ A+K P P+ ++++FL L+ YY+K +
Sbjct: 522 DKVEAIKTAPSPQDVTQLRAFLGLVNYYQKFL 553
>SB_39617| Best HMM Match : RVT_1 (HMM E-Value=4.7e-38)
Length = 1084
Score = 32.3 bits (70), Expect = 0.34
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +1
Query: 403 DKICAVKKFPLPKTQKEIKSFLDLIVYYRKLI 498
DK+ A+K P P+ ++++FL L+ YY+K +
Sbjct: 633 DKVEAIKTAPSPQDVTQLRAFLGLVNYYQKFL 664
>SB_29623| Best HMM Match : GM_CSF (HMM E-Value=5)
Length = 296
Score = 32.3 bits (70), Expect = 0.34
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +1
Query: 403 DKICAVKKFPLPKTQKEIKSFLDLIVYYRKLI 498
DK+ A+K P P+ ++++FL L+ YY+K +
Sbjct: 54 DKVEAIKTAPSPQDVTQLRAFLGLVNYYQKFL 85
>SB_23788| Best HMM Match : RVT_1 (HMM E-Value=4.7e-38)
Length = 1122
Score = 32.3 bits (70), Expect = 0.34
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +1
Query: 403 DKICAVKKFPLPKTQKEIKSFLDLIVYYRKLI 498
DK+ A+K P P+ ++++FL L+ YY+K +
Sbjct: 667 DKVEAIKTAPSPQDVTQLRAFLGLVNYYQKFL 698
>SB_19517| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1696
Score = 32.3 bits (70), Expect = 0.34
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +1
Query: 403 DKICAVKKFPLPKTQKEIKSFLDLIVYYRKLI 498
DK+ A+K P P+ ++++FL L+ YY+K +
Sbjct: 710 DKVEAIKTAPSPQDVTQLRAFLGLVNYYQKFL 741
>SB_9562| Best HMM Match : TetR_C (HMM E-Value=4)
Length = 242
Score = 32.3 bits (70), Expect = 0.34
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +1
Query: 403 DKICAVKKFPLPKTQKEIKSFLDLIVYYRKLI 498
DK+ A+K P P+ ++++FL L+ YY+K +
Sbjct: 105 DKVEAIKTAPSPQDVTQLRAFLGLVNYYQKFL 136
>SB_1797| Best HMM Match : rve (HMM E-Value=8.5e-35)
Length = 285
Score = 32.3 bits (70), Expect = 0.34
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +1
Query: 403 DKICAVKKFPLPKTQKEIKSFLDLIVYYRKLI 498
DK+ A+K P P+ ++++FL L+ YY+K +
Sbjct: 20 DKVEAIKTSPSPQDVTQLRAFLGLVNYYQKFL 51
>SB_37892| Best HMM Match : rve (HMM E-Value=2.1e-16)
Length = 824
Score = 31.9 bits (69), Expect = 0.46
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP Y R M S+ +GL+ V+ ++DD ++
Sbjct: 238 SAPEVYQRTMSSILQGLDGVICHIDDTLV 266
>SB_15453| Best HMM Match : Prenyltrans (HMM E-Value=0)
Length = 2376
Score = 31.9 bits (69), Expect = 0.46
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 436 PKTQKEIKSFLDLIVYYRKLIQDF 507
P+T KE++ + L+ YYR+ IQDF
Sbjct: 1445 PQTVKEVRRIVGLLGYYRRYIQDF 1468
>SB_49245| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 31.9 bits (69), Expect = 0.46
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP Y R M S+ +GL+ V+ ++DD ++
Sbjct: 49 SAPEVYQRTMSSILQGLDEVICHIDDTLV 77
>SB_49429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 918
Score = 31.5 bits (68), Expect = 0.60
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +1
Query: 403 DKICAVKKFPLPKTQKEIKSFLDLIVYYRK 492
DK+ A+K P P+ ++++FL L+ YY+K
Sbjct: 488 DKVEAIKTAPSPQDVTQLRAFLGLVNYYQK 517
>SB_18046| Best HMM Match : RVT_1 (HMM E-Value=0.34)
Length = 837
Score = 31.5 bits (68), Expect = 0.60
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +1
Query: 403 DKICAVKKFPLPKTQKEIKSFLDLIVYYRK 492
DK+ A+K P P+ ++++FL L+ YY+K
Sbjct: 311 DKVEAIKTAPSPQDVTQLRAFLGLVNYYQK 340
>SB_3438| Best HMM Match : RVT_1 (HMM E-Value=1.3e-30)
Length = 1405
Score = 31.5 bits (68), Expect = 0.60
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP Y R M S+ GL+ V+ ++DD ++
Sbjct: 396 SAPEVYQRTMSSILHGLDGVICHIDDTLV 424
>SB_14434| Best HMM Match : RVT_1 (HMM E-Value=8e-34)
Length = 335
Score = 31.1 bits (67), Expect = 0.80
Identities = 16/30 (53%), Positives = 22/30 (73%), Gaps = 2/30 (6%)
Frame = +3
Query: 282 APSTYLRLMDSVKRGLN-NV-LTYLDDVII 365
+P+T+ RLM+ GLN N+ L YLDDVI+
Sbjct: 158 SPATFQRLMERCLTGLNLNICLAYLDDVIV 187
>SB_28811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 982
Score = 31.1 bits (67), Expect = 0.80
Identities = 16/30 (53%), Positives = 22/30 (73%), Gaps = 2/30 (6%)
Frame = +3
Query: 282 APSTYLRLMDSVKRGLN-NV-LTYLDDVII 365
+P+T+ RLM+ GLN N+ L YLDDVI+
Sbjct: 435 SPATFQRLMERCLTGLNLNICLAYLDDVIV 464
>SB_51142| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39)
Length = 370
Score = 30.7 bits (66), Expect = 1.1
Identities = 9/29 (31%), Positives = 22/29 (75%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + +D++ +G++ V+ Y+DD++I
Sbjct: 108 SAPAVFQSTIDTILKGIDGVVCYIDDILI 136
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 403 DKICAVKKFPLPKTQKEIKSFLDLIVYYRKLI 498
+K+ AV P P E++SFL ++ YY K +
Sbjct: 191 EKVRAVVDAPAPTNVTELRSFLGMLQYYGKFL 222
>SB_50156| Best HMM Match : RVT_1 (HMM E-Value=7.2e-37)
Length = 493
Score = 30.7 bits (66), Expect = 1.1
Identities = 9/29 (31%), Positives = 22/29 (75%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + +D++ +G++ V+ Y+DD++I
Sbjct: 388 SAPAVFQSTIDTILKGIDGVVCYIDDILI 416
>SB_49539| Best HMM Match : RVT_1 (HMM E-Value=1.8e-39)
Length = 1311
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 391 RTNEDKICAVKKFPLPKTQKEIKSFLDLIVYYRKLI 498
R + +K+ AV P P E++SFL ++ YY K +
Sbjct: 488 RPSPEKVRAVVDAPAPTNVTELRSFLGMLQYYGKFL 523
Score = 29.9 bits (64), Expect = 1.8
Identities = 9/29 (31%), Positives = 22/29 (75%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + +D++ +G++ V+ Y+DD++I
Sbjct: 409 SAPAVFQFTIDTILKGIDGVVCYIDDILI 437
>SB_48126| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39)
Length = 1510
Score = 30.7 bits (66), Expect = 1.1
Identities = 9/29 (31%), Positives = 22/29 (75%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + +D++ +G++ V+ Y+DD++I
Sbjct: 554 SAPAVFQSTIDTILKGIDGVVCYIDDILI 582
>SB_47416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1413
Score = 30.7 bits (66), Expect = 1.1
Identities = 9/29 (31%), Positives = 22/29 (75%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + +D++ +G++ V+ Y+DD++I
Sbjct: 533 SAPAVFQSTIDTILKGIDGVVCYIDDILI 561
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 403 DKICAVKKFPLPKTQKEIKSFLDLIVYYRKLI 498
+K+ AV P P E++SFL ++ YY K +
Sbjct: 598 EKVRAVVDAPAPTNVTELRSFLGMLQYYGKFL 629
>SB_44967| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1284
Score = 30.7 bits (66), Expect = 1.1
Identities = 9/29 (31%), Positives = 22/29 (75%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + +D++ +G++ V+ Y+DD++I
Sbjct: 577 SAPAVFQSTIDTILKGIDGVVCYIDDILI 605
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +1
Query: 343 RISMTSLYVYTTSLQERTNEDKICAVKKFPLPKTQKEIKSFLDLIVYYRKLI 498
R++ + +Q ++K+ AV P P E++SFL ++ YY K +
Sbjct: 623 RLTEIRNFSQVVEMQFPGGQEKVRAVVDAPAPTNVTELRSFLGMLQYYGKFL 674
>SB_41330| Best HMM Match : Destabilase (HMM E-Value=5)
Length = 499
Score = 30.7 bits (66), Expect = 1.1
Identities = 9/29 (31%), Positives = 22/29 (75%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + +D++ +G++ V+ Y+DD++I
Sbjct: 457 SAPAVFQSTVDTILKGIDGVVCYIDDILI 485
>SB_39101| Best HMM Match : RVT_1 (HMM E-Value=2.4e-38)
Length = 856
Score = 30.7 bits (66), Expect = 1.1
Identities = 9/29 (31%), Positives = 22/29 (75%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + +D++ +G++ V+ Y+DD++I
Sbjct: 654 SAPAVFQSTIDTILKGIDGVVCYIDDILI 682
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 403 DKICAVKKFPLPKTQKEIKSFLDLIVYYRKLI 498
+K+ AV P P E++SFL ++ YY K +
Sbjct: 737 EKVRAVVDAPAPTNVTELRSFLGMLQYYGKFL 768
>SB_35577| Best HMM Match : RVP (HMM E-Value=3e-05)
Length = 349
Score = 30.7 bits (66), Expect = 1.1
Identities = 9/29 (31%), Positives = 22/29 (75%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + +D++ +G++ V+ Y+DD++I
Sbjct: 307 SAPAVFQSTIDTILKGIDGVVCYIDDILI 335
>SB_27768| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39)
Length = 366
Score = 30.7 bits (66), Expect = 1.1
Identities = 9/29 (31%), Positives = 22/29 (75%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + +D++ +G++ V+ Y+DD++I
Sbjct: 164 SAPAVFQSTIDTILKGIDGVVCYIDDILI 192
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 403 DKICAVKKFPLPKTQKEIKSFLDLIVYYRKLI 498
+K+ AV P P E++SFL ++ YY K +
Sbjct: 247 EKVRAVVDAPAPTNVTELRSFLGMLQYYGKFL 278
>SB_25140| Best HMM Match : RVT_1 (HMM E-Value=7.8e-38)
Length = 1425
Score = 30.7 bits (66), Expect = 1.1
Identities = 9/29 (31%), Positives = 22/29 (75%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + +D++ +G++ V+ Y+DD++I
Sbjct: 1223 SAPAVFQSTIDTILKGIDGVVCYIDDILI 1251
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 403 DKICAVKKFPLPKTQKEIKSFLDLIVYYRKLI 498
+K+ AV P P E++SFL ++ YY K +
Sbjct: 1306 EKVRAVVDAPAPTNVTELRSFLGMLQYYGKFL 1337
>SB_21103| Best HMM Match : RVT_1 (HMM E-Value=7.8e-38)
Length = 366
Score = 30.7 bits (66), Expect = 1.1
Identities = 9/29 (31%), Positives = 22/29 (75%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + +D++ +G++ V+ Y+DD++I
Sbjct: 164 SAPAVFQSTIDTILKGIDGVVCYIDDILI 192
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 403 DKICAVKKFPLPKTQKEIKSFLDLIVYYRKLI 498
+K+ AV P P E++SFL ++ YY K +
Sbjct: 247 EKVRAVVDAPAPTNVTELRSFLGMLQYYGKFL 278
>SB_15135| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39)
Length = 794
Score = 30.7 bits (66), Expect = 1.1
Identities = 9/29 (31%), Positives = 22/29 (75%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + +D++ +G++ V+ Y+DD++I
Sbjct: 689 SAPAVFQSTIDTILKGIDGVVCYIDDILI 717
>SB_11711| Best HMM Match : 7tm_1 (HMM E-Value=8.5e-10)
Length = 948
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -1
Query: 636 GFSKSGYCKTGH*LIPVYIFRRLICIHLSTLVCCFSSSIL 517
G + SG+ GH + + +R +C H + VC +S +IL
Sbjct: 190 GATSSGWMNGGHPSVQDGVVKRTVCFHSNAEVCRYSVTIL 229
>SB_9368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 874
Score = 30.7 bits (66), Expect = 1.1
Identities = 9/29 (31%), Positives = 22/29 (75%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + +D++ +G++ V+ Y+DD++I
Sbjct: 769 SAPAVFQSTIDTILKGIDGVVCYIDDILI 797
>SB_46540| Best HMM Match : RVT_1 (HMM E-Value=4.8e-27)
Length = 751
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/29 (55%), Positives = 21/29 (72%), Gaps = 2/29 (6%)
Frame = +3
Query: 285 PSTYLRLMDSVKRGLN-NV-LTYLDDVII 365
P+T+ RLM+ GLN N+ L YLDDVI+
Sbjct: 248 PATFQRLMERCLTGLNLNICLAYLDDVIV 276
>SB_45108| Best HMM Match : RVT_1 (HMM E-Value=4.9e-37)
Length = 1122
Score = 30.7 bits (66), Expect = 1.1
Identities = 9/29 (31%), Positives = 22/29 (75%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + +D++ +G++ V+ Y+DD++I
Sbjct: 570 SAPAVFQSTIDTILKGIDGVVCYIDDILI 598
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 403 DKICAVKKFPLPKTQKEIKSFLDLIVYYRKLI 498
+K+ AV P P E++SFL ++ YY K +
Sbjct: 653 EKVRAVLDAPAPTNVTELRSFLGMLQYYGKFL 684
>SB_44757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 789
Score = 30.7 bits (66), Expect = 1.1
Identities = 9/29 (31%), Positives = 22/29 (75%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + +D++ +G++ V+ Y+DD++I
Sbjct: 276 SAPAVFQSTIDTILKGIDGVVCYIDDILI 304
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 403 DKICAVKKFPLPKTQKEIKSFLDLIVYYRKLI 498
+K+ AV P P E++SFL ++ YY K +
Sbjct: 359 EKVRAVVDAPAPTNVTELRSFLGMLQYYGKFL 390
>SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39)
Length = 1750
Score = 30.7 bits (66), Expect = 1.1
Identities = 9/29 (31%), Positives = 22/29 (75%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + +D++ +G++ V+ Y+DD++I
Sbjct: 532 SAPAVFQSTIDTILKGIDGVVCYIDDILI 560
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 403 DKICAVKKFPLPKTQKEIKSFLDLIVYYRKLI 498
+K+ AV P P E++SFL ++ YY K +
Sbjct: 615 EKVRAVVDAPAPTNVTELRSFLGMLQYYGKFL 646
>SB_15324| Best HMM Match : RVP (HMM E-Value=8.1e-05)
Length = 415
Score = 30.7 bits (66), Expect = 1.1
Identities = 9/29 (31%), Positives = 22/29 (75%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + +D++ +G++ V+ Y+DD++I
Sbjct: 373 SAPAVFQSTIDTILKGIDGVVCYIDDILI 401
>SB_57814| Best HMM Match : RVT_thumb (HMM E-Value=5.6)
Length = 223
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYY 486
++KI A+++ P P KE+++FL ++ YY
Sbjct: 121 DEKIKAIQESPRPSNLKELQAFLGMLNYY 149
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M+++ +G+ NV+ +DD++I
Sbjct: 39 SAPGIFQRTMENLLQGIPNVVVRIDDILI 67
>SB_56941| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1034
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYY 486
++KI A+++ P P KE+++FL ++ YY
Sbjct: 121 DEKIKAIQESPRPSNLKELQAFLGMLNYY 149
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M+++ +G+ NV+ +DD++I
Sbjct: 39 SAPGIFQRTMENLLQGIPNVVVRIDDILI 67
>SB_56859| Best HMM Match : rve (HMM E-Value=4.8e-35)
Length = 1671
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYY 486
++KI A+++ P P KE+++FL ++ YY
Sbjct: 828 DEKIKAIQESPRPSNLKELQAFLGMLNYY 856
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M+++ +G+ NV+ +DD++I
Sbjct: 746 SAPGIFQRTMENLLQGIPNVVVRIDDILI 774
>SB_56338| Best HMM Match : DUF970 (HMM E-Value=1.9)
Length = 554
Score = 30.3 bits (65), Expect = 1.4
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + R +DS+ R + V Y+DD+++
Sbjct: 68 SAPAIFQRTIDSILRDIPGVAVYMDDILV 96
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYYRKLI 498
EDK+ A+ + P E+KS+L L+ YY + +
Sbjct: 150 EDKVQALLETRAPVNVSELKSYLGLLNYYNRFL 182
>SB_52192| Best HMM Match : Fibrinogen_C (HMM E-Value=0.077)
Length = 723
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYY 486
++KI A+++ P P KE+++FL ++ YY
Sbjct: 74 DEKIKAIQESPRPSNLKELQAFLGMLNYY 102
>SB_42569| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32)
Length = 342
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYY 486
++KI A+++ P P KE+++FL ++ YY
Sbjct: 204 DEKIKAIQESPRPSNLKELQAFLGMLNYY 232
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M+++ +G+ NV+ +DD++I
Sbjct: 122 SAPGIFQRTMENLLQGIPNVVVRIDDILI 150
>SB_40877| Best HMM Match : RVT_1 (HMM E-Value=2.9e-28)
Length = 734
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYY 486
++KI A+++ P P KE+++FL ++ YY
Sbjct: 651 DEKIKAIQESPRPSNLKELQAFLGMLNYY 679
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M+++ +G+ NV+ +DD++I
Sbjct: 569 SAPGIFQRTMENLLQGIPNVVVRIDDILI 597
>SB_36217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1356
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Frame = +3
Query: 282 APSTYLRLMDSV--KRGLNNVLTYLDDVII 365
AP+T+ RLM V K L +++ YLDD+I+
Sbjct: 558 APATFQRLMQGVFRKELLQSMMVYLDDIIV 587
>SB_24578| Best HMM Match : rve (HMM E-Value=4.8e-35)
Length = 1772
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYY 486
++KI A+++ P P KE+++FL ++ YY
Sbjct: 20 DEKIKAIQESPRPSNLKELQAFLGMLNYY 48
>SB_16279| Best HMM Match : DNA_pol_viral_C (HMM E-Value=3.6)
Length = 360
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYY 486
++KI A+++ P P KE+++FL ++ YY
Sbjct: 20 DEKIKAIQESPRPSNLKELQAFLGMLNYY 48
>SB_13231| Best HMM Match : DNA_pol_viral_C (HMM E-Value=2.1)
Length = 390
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYY 486
++KI A+++ P P KE+++FL ++ YY
Sbjct: 74 DEKIKAIQESPRPSNLKELQAFLGMLNYY 102
>SB_11123| Best HMM Match : RVT_1 (HMM E-Value=3.4e-27)
Length = 1154
Score = 30.3 bits (65), Expect = 1.4
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + R +DS+ R + V Y+DD+++
Sbjct: 394 SAPAIFQRTIDSILRDIPGVAAYMDDILV 422
>SB_9298| Best HMM Match : rve (HMM E-Value=4.8e-35)
Length = 1514
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYY 486
++KI A+++ P P KE+++FL ++ YY
Sbjct: 521 DEKIKAIQESPRPSNLKELQAFLGMLNYY 549
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M+++ +G+ NV+ +DD++I
Sbjct: 439 SAPGIFQRTMENLLQGIPNVVVRIDDILI 467
>SB_8612| Best HMM Match : RVT_1 (HMM E-Value=2.1e-32)
Length = 621
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYY 486
++KI A+++ P P KE+++FL ++ YY
Sbjct: 483 DEKIKAIQESPRPSNLKELQAFLGMLNYY 511
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M+++ +G+ NV+ +DD++I
Sbjct: 400 SAPGIFQRTMENLLQGIPNVVVRIDDILI 428
>SB_7050| Best HMM Match : RVT_thumb (HMM E-Value=5.6)
Length = 212
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYY 486
++KI A+++ P P KE+++FL ++ YY
Sbjct: 137 DEKIKAIQESPRPSNLKELQAFLGMLNYY 165
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M+++ +G+ NV+ +DD++I
Sbjct: 55 SAPGIFQRTMENLLQGIPNVVVRIDDILI 83
>SB_3512| Best HMM Match : rve (HMM E-Value=4.7e-35)
Length = 1073
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYY 486
++KI A+++ P P KE+++FL ++ YY
Sbjct: 74 DEKIKAIQESPRPSNLKELQAFLGMLNYY 102
>SB_1340| Best HMM Match : rve (HMM E-Value=3.1e-14)
Length = 825
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYY 486
++KI A+++ P P KE+++FL ++ YY
Sbjct: 201 DEKIKAIQESPRPSNLKELQAFLGMLNYY 229
>SB_697| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32)
Length = 603
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYY 486
++KI A+++ P P KE+++FL ++ YY
Sbjct: 538 DEKIKAIQESPRPSNLKELQAFLGMLNYY 566
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M+++ +G+ NV+ +DD++I
Sbjct: 456 SAPGIFQRTMENLLQGIPNVVVRIDDILI 484
>SB_59245| Best HMM Match : SspH (HMM E-Value=5.7)
Length = 275
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYY 486
++KI A+++ P P KE+++FL ++ YY
Sbjct: 137 DEKIKAIQESPRPSNLKELQAFLGMLNYY 165
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M+++ +G+ NV+ +DD++I
Sbjct: 55 SAPGIFQRTMENLLQGIPNVVVRIDDILI 83
>SB_55673| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32)
Length = 249
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYY 486
++KI A+++ P P KE+++FL ++ YY
Sbjct: 204 DEKIKAIQESPRPSNLKELQAFLGMLNYY 232
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M+++ +G+ NV+ +DD++I
Sbjct: 122 SAPGIFQRTMENLLQGIPNVVVRIDDILI 150
>SB_54590| Best HMM Match : rve (HMM E-Value=4.8e-35)
Length = 1309
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYY 486
++KI A+++ P P KE+++FL ++ YY
Sbjct: 624 DEKIKAIQESPRPSNLKELQAFLGMLNYY 652
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M+++ +G+ NV+ +DD++I
Sbjct: 542 SAPGIFQRTMENLLQGIPNVVVRIDDILI 570
>SB_53290| Best HMM Match : RVT_1 (HMM E-Value=3.8e-31)
Length = 1090
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYY 486
++KI A+++ P P KE+++FL ++ YY
Sbjct: 655 DEKIKAIQESPRPSNLKELQAFLGMLNYY 683
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M+++ +G+ NV+ +DD++I
Sbjct: 573 SAPGIFQRTMENLLQGIPNVVVRIDDILI 601
>SB_53100| Best HMM Match : HMD (HMM E-Value=2.8)
Length = 159
Score = 30.3 bits (65), Expect = 1.4
Identities = 9/29 (31%), Positives = 22/29 (75%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + +D++ +G++ V+ Y+DD++I
Sbjct: 47 SAPAVFQSTIDTILKGIDGVVYYIDDILI 75
>SB_45153| Best HMM Match : rve (HMM E-Value=0)
Length = 2264
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYY 486
++KI A+++ P P KE+++FL ++ YY
Sbjct: 1563 DEKIKAIQESPRPSNLKELQAFLGMLNYY 1591
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M+++ +G+ NV+ +DD++I
Sbjct: 496 SAPGIFQRTMENLLQGIPNVVVRIDDILI 524
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M+++ +G+ NV+ +DD++I
Sbjct: 1481 SAPGIFQRTMENLLQGIPNVVVRIDDILI 1509
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYY 486
++KI A+++ P P KE+++ L ++ YY
Sbjct: 578 DEKIKAIQESPRPSNLKELQAXLGMLNYY 606
>SB_45147| Best HMM Match : zf-CCHC (HMM E-Value=0.0051)
Length = 522
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +1
Query: 403 DKICAVKKFPLPKTQKEIKSFLDLIVYYRKLI 498
DK+ +K P P+ ++++FL L+ YY+K +
Sbjct: 351 DKLETIKTAPSPQDVTQLRAFLGLVNYYQKFL 382
>SB_39667| Best HMM Match : rve (HMM E-Value=9e-32)
Length = 1845
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYY 486
++KI A+++ P P KE+++FL ++ YY
Sbjct: 581 DEKIKAIQESPRPSNLKELQAFLGMLNYY 609
>SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3212
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYY 486
++KI A+++ P P KE+++FL ++ YY
Sbjct: 655 DEKIKAIQESPRPSNLKELQAFLGMLNYY 683
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M+++ +G+ NV+ +DD++I
Sbjct: 573 SAPGIFQRTMENLLQGIPNVVVRIDDILI 601
>SB_27987| Best HMM Match : RVT_1 (HMM E-Value=4.8e-32)
Length = 779
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYY 486
++KI A+++ P P KE+++FL ++ YY
Sbjct: 655 DEKIKAIQESPRPSNLKELQAFLGMLNYY 683
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M+++ +G+ NV+ +DD++I
Sbjct: 573 SAPGIFQRTMENLLQGIPNVVVRIDDILI 601
>SB_24280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1351
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYY 486
++KI A+++ P P KE+++FL ++ YY
Sbjct: 622 DEKIKAIQESPRPSNLKELQAFLGMLNYY 650
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVIICIYDI 380
+AP + R M+++ +G+ NV+ +DD++I ++
Sbjct: 573 SAPGIFQRTMENLLQGIPNVVVRIDDILIAAPEV 606
>SB_23220| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32)
Length = 1597
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYY 486
++KI A+++ P P KE+++FL ++ YY
Sbjct: 811 DEKIKAIQESPRPSNLKELQAFLGMLNYY 839
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M+++ +G+ NV+ +DD++I
Sbjct: 729 SAPGIFQRTMENLLQGIPNVVVRIDDILI 757
>SB_17897| Best HMM Match : Ldl_recept_a (HMM E-Value=1.2e-14)
Length = 1217
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +1
Query: 403 DKICAVKKFPLPKTQKEIKSFLDLIVYYRKLI 498
DK+ A+K P P+ ++++FL L+ Y++K +
Sbjct: 440 DKVEAIKTAPSPQDVTQLRAFLGLVNYHQKFL 471
>SB_14088| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32)
Length = 621
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYY 486
++KI A+++ P P KE+++FL ++ YY
Sbjct: 483 DEKIKAIQESPRPSNLKELQAFLGMLNYY 511
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M+++ +G+ NV+ +DD++I
Sbjct: 401 SAPGIFQRTMENLLQGIPNVVVRIDDILI 429
>SB_12609| Best HMM Match : rve (HMM E-Value=4.8e-35)
Length = 623
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYY 486
++KI A+++ P P KE+++FL ++ YY
Sbjct: 74 DEKIKAIQESPRPSNLKELQAFLGMLNYY 102
>SB_12601| Best HMM Match : rve (HMM E-Value=5e-29)
Length = 568
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYY 486
++KI A+++ P P KE+++FL ++ YY
Sbjct: 74 DEKIKAIQESPRPSNLKELQAFLGMLNYY 102
>SB_9355| Best HMM Match : rve (HMM E-Value=4.8e-35)
Length = 1520
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYY 486
++KI A+++ P P KE+++FL ++ YY
Sbjct: 864 DEKIKAIQESPRPSNLKELQAFLGMLNYY 892
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M+++ +G+ NV+ +DD++I
Sbjct: 782 SAPGIFQRTMENLLQGIPNVVVRIDDILI 810
>SB_4461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 747
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYY 486
++KI A+++ P P KE+++FL ++ YY
Sbjct: 653 DEKIKAIQESPRPSNLKELQAFLGMLNYY 681
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M+++ +G+ NV+ +DD++I
Sbjct: 571 SAPGIFQRTMENLLQGIPNVVVRIDDILI 599
>SB_3870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYY 486
++KI A+++ P P KE+++FL ++ YY
Sbjct: 721 DEKIKAIQESPRPSNLKELQAFLGMLNYY 749
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M+++ +G+ NV+ +DD++I
Sbjct: 639 SAPGIFQRTMENLLQGIPNVVVRIDDILI 667
>SB_58082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1200
Score = 29.9 bits (64), Expect = 1.8
Identities = 9/39 (23%), Positives = 26/39 (66%)
Frame = +1
Query: 397 NEDKICAVKKFPLPKTQKEIKSFLDLIVYYRKLIQDFEN 513
+++++ +++FP P++ + +K + ++ YY K I +F +
Sbjct: 525 DQERLRPLQEFPPPQSSQSLKRVVGMLAYYAKWIPNFSD 563
>SB_8440| Best HMM Match : RVT_1 (HMM E-Value=4.3e-18)
Length = 878
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/36 (30%), Positives = 24/36 (66%)
Frame = +1
Query: 391 RTNEDKICAVKKFPLPKTQKEIKSFLDLIVYYRKLI 498
+ + +KI A+K+ P PKT+++++ L ++ Y + I
Sbjct: 792 KPDPEKIKAIKEMPQPKTKQDLQRLLGMVNYLSQYI 827
>SB_21429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 840
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Frame = +3
Query: 282 APSTYLRLMDSVKRGL--NNVLTYLDDVII 365
AP+T+ RLM+ R L N + Y+DDVI+
Sbjct: 781 APATFQRLMEHCLRDLNYNTCVVYMDDVIV 810
>SB_8975| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1002
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Frame = +3
Query: 282 APSTYLRLMDSVKRGL--NNVLTYLDDVII 365
AP+T+ RLM+ + GL + L Y+DD+I+
Sbjct: 443 APATFERLMEKLLSGLSWDTCLVYIDDIIV 472
>SB_27499| Best HMM Match : RVT_1 (HMM E-Value=9.2e-39)
Length = 872
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 403 DKICAVKKFPLPKTQKEIKSFLDLIVYYRKLI 498
+K+ AV P P E++SFL ++ YY K +
Sbjct: 305 EKVRAVVDAPAPNNVTELRSFLGMLQYYGKFL 336
Score = 28.3 bits (60), Expect = 5.6
Identities = 8/29 (27%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + +D++ + ++ V+ Y+DD++I
Sbjct: 222 SAPAVFQSTIDTILKSIDGVVCYIDDILI 250
>SB_21496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1787
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 391 RTNEDKICAVKKFPLPKTQKEIKSFLDLIVYYRKLIQDFENSQNT 525
R DK+ AVK+ P+ ++ ++SFL + Y I + N T
Sbjct: 558 RPAPDKVRAVKESERPEDKEAVRSFLGMAGYLDNFISAYANHSRT 602
>SB_15440| Best HMM Match : ig (HMM E-Value=5.5e-06)
Length = 501
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -1
Query: 636 GFSKSGYCKTGH*LIPVYIFRRLICIHLSTLVCCFSSSIL 517
G + SG+ GH + + +R +C H + +C +S +IL
Sbjct: 149 GATSSGWMNGGHPSLQDGVVKRTVCFHSNAQMCRYSVTIL 188
>SB_7810| Best HMM Match : RVT_1 (HMM E-Value=2.8026e-45)
Length = 732
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Frame = +3
Query: 282 APSTYLRLMDSVKRGL--NNVLTYLDDVII 365
AP+T+ RLM+ R L N + Y+DDVI+
Sbjct: 647 APATFQRLMEHCLRDLNYNTCVVYMDDVIV 676
>SB_2074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1266
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 403 DKICAVKKFPLPKTQKEIKSFLDLIVYYRKLI 498
+K+ AV P P E++SFL ++ YY K +
Sbjct: 836 EKVRAVVDAPAPNNVTELRSFLGMLQYYGKFL 867
Score = 28.3 bits (60), Expect = 5.6
Identities = 8/29 (27%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + +D++ + ++ V+ Y+DD++I
Sbjct: 753 SAPAVFQSTIDTILKSIDGVVCYIDDILI 781
>SB_47769| Best HMM Match : zf-CCHC (HMM E-Value=0.00034)
Length = 616
Score = 29.1 bits (62), Expect = 3.2
Identities = 9/31 (29%), Positives = 20/31 (64%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVIICI 371
+AP+ + R ++ + G+ V YLDD+++ +
Sbjct: 577 SAPAAFQRAIEELLHGIPQVAVYLDDILVTV 607
>SB_43121| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32)
Length = 1037
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M+++ +G+ NV+ +DD++I
Sbjct: 573 SAPGIFQRTMENLLQGIPNVVVRIDDILI 601
>SB_42447| Best HMM Match : RVT_1 (HMM E-Value=1.5e-32)
Length = 479
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M+++ +G+ NV+ +DD++I
Sbjct: 402 SAPGIFQRTMENLLQGIPNVVVRIDDILI 430
>SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1829
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYYRKLIQ 501
+DK+ A+ K P+ E+K++L L+ YY K ++
Sbjct: 1171 KDKVEALVKAKTPENVTELKAYLGLLNYYGKFLK 1204
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + R ++ + G+ V YLDD+++
Sbjct: 1089 SAPAAFQRAIEELLHGIPQVAVYLDDILV 1117
>SB_33029| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 927
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M+++ +G+ NV+ +DD++I
Sbjct: 850 SAPGIFQRTMENLLQGIPNVVVRIDDILI 878
>SB_24490| Best HMM Match : RVT_1 (HMM E-Value=1e-32)
Length = 792
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M+++ +G+ NV+ +DD++I
Sbjct: 275 SAPGIFQRTMENLLQGIPNVVVRIDDILI 303
>SB_20314| Best HMM Match : RVT_1 (HMM E-Value=1e-32)
Length = 1556
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M+++ +G+ NV+ +DD++I
Sbjct: 818 SAPGIFQRTMENLLQGIPNVVVRIDDILI 846
>SB_6030| Best HMM Match : rve (HMM E-Value=8.7e-30)
Length = 1280
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYYRKLIQ 501
+DK+ A+ K P+ E+K++L L+ YY K ++
Sbjct: 462 KDKVEALVKAKTPENVTELKAYLGLLNYYGKFLK 495
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + R ++ + G+ V YLDD+++
Sbjct: 380 SAPAAFQRAIEELLHGIPQVAVYLDDILV 408
>SB_4267| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 436 PKTQKEIKSFLDLIVYYRKLIQDF 507
PK KE+++FL YYR +++F
Sbjct: 60 PKNTKELQTFLGFASYYRSFVENF 83
>SB_411| Best HMM Match : RVT_1 (HMM E-Value=2.5e-29)
Length = 730
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M+++ +G+ NV+ +DD++I
Sbjct: 464 SAPGIFQRTMENLLQGIPNVVVRIDDILI 492
>SB_45140| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32)
Length = 868
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M+++ +G+ NV+ +DD++I
Sbjct: 340 SAPGIFQRTMENLLQGIPNVVVRIDDILI 368
>SB_39931| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32)
Length = 1023
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M+++ +G+ NV+ +DD++I
Sbjct: 595 SAPGIFQRTMENLLQGIPNVVVRIDDILI 623
>SB_39271| Best HMM Match : Secretin_N (HMM E-Value=2.4)
Length = 300
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYYRKLIQ 501
+DK+ A+ K P+ E+K++L L+ YY K ++
Sbjct: 113 KDKVEALVKAKTPENVTELKAYLGLLNYYGKFLK 146
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + R ++ + G+ V YLDD+++
Sbjct: 31 SAPAAFQRAIEELLHGIPQVAVYLDDILV 59
>SB_38698| Best HMM Match : MiaE (HMM E-Value=5.8)
Length = 284
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 403 DKICAVKKFPLPKTQKEIKSFLDLIVYYRKLI 498
+K+ AV P P E++SFL ++ YY K +
Sbjct: 69 EKVRAVVDAPAPTNVTELRSFLGMLQYYGKFL 100
>SB_29480| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32)
Length = 252
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M+++ +G+ NV+ +DD++I
Sbjct: 175 SAPGIFQRTMENLLQGIPNVVVRIDDILI 203
>SB_28069| Best HMM Match : RVT_1 (HMM E-Value=1.8e-28)
Length = 593
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M+++ +G+ NV+ +DD++I
Sbjct: 516 SAPGIFQRTMENLLQGIPNVVVRIDDILI 544
>SB_22521| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32)
Length = 294
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M+++ +G+ NV+ +DD++I
Sbjct: 217 SAPGIFQRTMENLLQGIPNVVVRIDDILI 245
>SB_18645| Best HMM Match : RVT_1 (HMM E-Value=0.0003)
Length = 1205
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 436 PKTQKEIKSFLDLIVYYRKLIQDF 507
PK KE+++FL YYR +++F
Sbjct: 676 PKNTKELQTFLGFASYYRSFVENF 699
>SB_16795| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 972
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M+++ +G+ NV+ +DD++I
Sbjct: 573 SAPGIFQRTMENLLQGIPNVVVRIDDILI 601
>SB_13297| Best HMM Match : RnaseH (HMM E-Value=0.37)
Length = 393
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/30 (50%), Positives = 22/30 (73%), Gaps = 2/30 (6%)
Frame = +3
Query: 282 APSTYLRLMDSVKRGLN-NV-LTYLDDVII 365
+P+T+ RLM+ GLN N+ L YLD+VI+
Sbjct: 8 SPATFQRLMEHCLTGLNLNICLVYLDNVIV 37
>SB_12900| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 883
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYYRKLIQ 501
+DK+ A+ K P+ E+K++L L+ YY K ++
Sbjct: 462 KDKVEALVKAKTPENVTELKAYLGLLNYYGKFLK 495
>SB_9508| Best HMM Match : Secretin_N (HMM E-Value=1.8)
Length = 391
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYYRKLIQ 501
+DK+ A+ K P+ E+K++L L+ YY K ++
Sbjct: 95 KDKVEALVKAKTPENVTELKAYLGLLNYYGKFLK 128
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + R ++ + G+ V YLDD+++
Sbjct: 13 SAPAAFQRAIEELLHGIPQVAVYLDDILV 41
>SB_55897| Best HMM Match : RVT_1 (HMM E-Value=5.3e-37)
Length = 732
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYYRKLIQ 501
+DK+ A+ K P+ E+K++L L+ YY K ++
Sbjct: 228 KDKVEALVKAKTPENVTELKAYLGLMNYYGKFLK 261
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + R ++ + G+ V YLDD+++
Sbjct: 146 SAPAAFQRAIEELLHGIPQVAVYLDDILV 174
>SB_39090| Best HMM Match : zf-piccolo (HMM E-Value=0.81)
Length = 245
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 436 PKTQKEIKSFLDLIVYYRKLIQDF 507
PK KE+++FL YYR +++F
Sbjct: 99 PKNTKELQTFLGFASYYRSFVKNF 122
>SB_16776| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP Y M S+ +GL+ V+ ++DD ++
Sbjct: 416 SAPEVYQCTMSSILQGLDGVICHIDDTLV 444
>SB_2440| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +3
Query: 474 NSLLQKVDSRF*KLTKYLKKNSRLVLTDGYI 566
N +L++VD F KLTK + N+RL +GY+
Sbjct: 171 NEILKRVDKAFEKLTKDM--NNRLKTMEGYV 199
>SB_663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2028
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 436 PKTQKEIKSFLDLIVYYRKLIQDF 507
PK KE+++FL YYR +++F
Sbjct: 597 PKNTKELQTFLGFASYYRSFVKNF 620
>SB_57833| Best HMM Match : RnaseH (HMM E-Value=0.18)
Length = 366
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 436 PKTQKEIKSFLDLIVYYRKLIQDF 507
PK KE+++FL YYR +++F
Sbjct: 60 PKNTKELQTFLGFASYYRSFVKNF 83
>SB_58015| Best HMM Match : rve (HMM E-Value=0.00087)
Length = 1333
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +1
Query: 391 RTNEDKICAVKKFPLPKTQKEIKSFLDLIVYYRKLI 498
+ + +KI A+K+ P P+T+++++ L ++ Y + I
Sbjct: 507 KPDPEKIKAIKEMPQPETKQDLQRLLGMVNYLSQYI 542
>SB_51755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 406 KICAVKKFPLPKTQKEIKSFLDLIVYYRKLI 498
K+ AV P P E++SFL ++ YY K +
Sbjct: 2 KVRAVVDAPAPTNVTELRSFLGMLQYYGKFL 32
>SB_48993| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + R ++ + G+ V YLDD+++
Sbjct: 31 SAPAAFQRAIEELLHGIPQVAVYLDDILV 59
>SB_25071| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + R ++ + G+ V YLDD+++
Sbjct: 31 SAPAAFQRAIEELLHGIPQVAVYLDDILV 59
>SB_20246| Best HMM Match : RVT_1 (HMM E-Value=1.4e-30)
Length = 1191
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVIICIYDIITRTNERR*NMC---CKEISTT*NPE 449
+AP + + MD GL L ++DD+++ D N++R EI T NP+
Sbjct: 562 SAPEYFQKKMDQELAGLEGRLCHMDDILVVGKD--QAENDKRLAAVFHRITEIGMTLNPD 619
Query: 450 RNKIILRFNSLLQKVDS 500
+ K + L Q +D+
Sbjct: 620 KCKFSEKIEYLGQVIDN 636
>SB_53144| Best HMM Match : RVT_thumb (HMM E-Value=0.14)
Length = 272
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +1
Query: 391 RTNEDKICAVKKFPLPKTQKEIKSFLDLIVYYRKLI 498
+ + +KI A+K+ P P+T+++++ L ++ Y + I
Sbjct: 86 KPDPEKIKAIKEMPQPETKQDLQRLLGMVNYLSQYI 121
>SB_46697| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + R ++ + G+ V YLDD+++
Sbjct: 31 SAPAAFQRAIEELLHGIPQVAVYLDDILV 59
>SB_35785| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1089
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + R ++ + G+ V YLDD+++
Sbjct: 521 SAPAAFQRAIEELLHGIPQVAVYLDDILV 549
>SB_31551| Best HMM Match : RVT_1 (HMM E-Value=5.3e-37)
Length = 429
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + R ++ + G+ V YLDD+++
Sbjct: 119 SAPAAFQRAIEELLHGIPQVAVYLDDILV 147
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYYRKLIQ 501
+DK+ A+ K P+ E++++L L+ YY K ++
Sbjct: 201 KDKVEALVKAKTPENVTELRAYLGLLNYYGKFLK 234
>SB_26552| Best HMM Match : MannoseP_isomer (HMM E-Value=7.4)
Length = 329
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + R ++ + G+ V YLDD+++
Sbjct: 299 SAPAAFQRAIEELLHGIPQVAVYLDDILV 327
>SB_22028| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 406 KICAVKKFPLPKTQKEIKSFLDLIVYYRKLI 498
K+ AV P P E++SFL ++ YY K +
Sbjct: 2 KVRAVVDAPAPANVTELRSFLGMLQYYGKFL 32
>SB_18117| Best HMM Match : rve (HMM E-Value=1.7e-29)
Length = 1544
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP+ + R ++ + G+ V YLDD+++
Sbjct: 589 SAPAAFQRAIEELLHGIPQVAVYLDDILV 617
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYYRKLI 498
+DK+ A+ K P+ E+K++L L+ YY L+
Sbjct: 671 KDKVEALVKAKTPENVTELKAYLGLMNYYGLLV 703
>SB_14854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 406 KICAVKKFPLPKTQKEIKSFLDLIVYYRKLI 498
K+ AV P P E++SFL ++ YY K +
Sbjct: 2 KVRAVVDAPAPTNVTELRSFLGMLQYYGKFL 32
>SB_38788| Best HMM Match : rve (HMM E-Value=4e-06)
Length = 956
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 394 TNEDKICAVKKFPLPKTQKEIKSFLDLIVYYRKLIQD 504
T+ +K A++ FP P T KE++ F ++ K + D
Sbjct: 457 TDPEKNKAIQDFPRPNTVKELQRFNGMVNQLAKFLPD 493
>SB_3606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 530
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVIIC 368
+AP M ++ RGL+ V +DD+++C
Sbjct: 309 SAPKHSQERMSAILRGLDGVARMMDDILVC 338
>SB_40710| Best HMM Match : RVT_1 (HMM E-Value=1.7e-25)
Length = 736
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVIICIYDIITRTNERR*NMC---CKEISTT*NPE 449
+AP + + MD GL L ++DD+++ D ++RR EI T NP+
Sbjct: 198 SAPQYFQKKMDQELAGLEGTLCHMDDILVVGKD--QAEHDRRLAAVLHRITEIGMTLNPD 255
Query: 450 RNKIILRFNSLLQK 491
+++ LL+K
Sbjct: 256 KSERTQPLRDLLKK 269
>SB_27585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYYRKLIQ 501
+DK+ A+ K P+ E++++L L+ YY K ++
Sbjct: 21 KDKVEALVKAKTPENVTELRAYLGLLNYYGKFLK 54
>SB_14634| Best HMM Match : ATP-synt_E (HMM E-Value=2.6)
Length = 309
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +1
Query: 400 EDKICAVKKFPLPKTQKEIKSFLDLIVYYRKLIQ 501
+DK+ A+ K P+ E++++L L+ YY K ++
Sbjct: 21 KDKVEALVKAKTPENVTELRAYLGLLNYYGKFLK 54
>SB_52907| Best HMM Match : RVT_1 (HMM E-Value=2.4e-17)
Length = 344
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/29 (31%), Positives = 20/29 (68%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + + M ++ RGL+ V+ +DD+++
Sbjct: 164 SAPEHFQKRMSAILRGLDGVVCMMDDILL 192
>SB_52035| Best HMM Match : RVT_1 (HMM E-Value=0.067)
Length = 344
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M GL V+ ++DD++I
Sbjct: 248 SAPEVFQRTMSMTLEGLEGVVCHMDDILI 276
>SB_44431| Best HMM Match : Coat_F (HMM E-Value=1.3)
Length = 367
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +1
Query: 391 RTNEDKICAVKKFPLPKTQKEIKSFLDLIVYYRKLIQDFENSQNT*RK 534
+ E ++ AV P+T E++SFL L+ + + I D + R+
Sbjct: 119 KNKESRVKAVLSAKEPQTAGEVRSFLGLVNFSARFIPDLATTAEPLRR 166
>SB_31270| Best HMM Match : rve (HMM E-Value=0.0043)
Length = 479
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+A + R +++V +GL V+ YLDD+++
Sbjct: 222 SAVGLFQRTIENVLKGLPAVIVYLDDILV 250
>SB_44255| Best HMM Match : RVT_1 (HMM E-Value=7.6e-29)
Length = 1017
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+AP + R M + GL+ V+ +DD++I
Sbjct: 432 SAPEFFQRAMSGILEGLDGVVCQMDDILI 460
>SB_29817| Best HMM Match : Keratin_B2 (HMM E-Value=6.3)
Length = 384
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/36 (25%), Positives = 22/36 (61%)
Frame = +1
Query: 397 NEDKICAVKKFPLPKTQKEIKSFLDLIVYYRKLIQD 504
++ K A+ + P P+ ++++SF ++ YY + + D
Sbjct: 193 SKTKTGAMTQLPNPENVEQLRSFFGMVQYYSRFLPD 228
>SB_130| Best HMM Match : rve (HMM E-Value=0.0043)
Length = 297
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +3
Query: 279 TAPSTYLRLMDSVKRGLNNVLTYLDDVII 365
+A + R +++V +GL V+ YLDD+++
Sbjct: 87 SAVGLFQRTIENVLKGLPAVIVYLDDILV 115
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,557,388
Number of Sequences: 59808
Number of extensions: 295673
Number of successful extensions: 1010
Number of sequences better than 10.0: 145
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1620947750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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