Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1459
         (621 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   2.1  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   6.3  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   6.3  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   6.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.3  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -1

Query: 597 NSPNLVSPSTSPVVRKATPSGFRQPQP 517
           N PN  +PSTS  V++  P    Q +P
Sbjct: 32  NVPNFAAPSTSTAVQR--PQAILQVRP 56


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 447 CLAPDQRPPTDPI 485
           CLAP  +PP  PI
Sbjct: 29  CLAPIPQPPAYPI 41


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = +1

Query: 151 NMDTGDLES--IINQIFTSAKPPTQLQPVTQPSVADRLHRPWCLAS 282
           ++ TG   S  I +  +T++   +   P +  S     HR WC +S
Sbjct: 194 HVSTGSTSSPTIASATYTNSANSSIWSPASIDSFTLEQHRSWCSSS 239


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 447 CLAPDQRPPTDPI 485
           CLAP  +PP  PI
Sbjct: 29  CLAPIPQPPAYPI 41


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +3

Query: 333  CVNYYLCN 356
            C  YYLCN
Sbjct: 2249 CAQYYLCN 2256


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,157
Number of Sequences: 336
Number of extensions: 2740
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)