Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1459
         (621 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    25   0.45 
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    23   2.4  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    23   2.4  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   4.2  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   9.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   9.7  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = +2

Query: 512 NQGCGWRNPDGVAFRTTGDVDGETKFGEFPWMVAI 616
           N  CGW+NP  +   T       T   EFP M  I
Sbjct: 150 NCNCGWKNPSRIVGGT------NTGINEFPMMAGI 178


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 459 REPDSRRRCTMNTGHC 412
           R+PD   +C    GHC
Sbjct: 28  RQPDGMNQCQAVNGHC 43


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 459 REPDSRRRCTMNTGHC 412
           R+PD   +C    GHC
Sbjct: 28  RQPDGMNQCQAVNGHC 43


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -1

Query: 570 TSPVVRKATPSGFRQPQPWFMAGSP 496
           +S +V + +PS  R P P  +   P
Sbjct: 29  SSSIVDRRSPSSSRSPSPSLLTSQP 53



 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -3

Query: 310 VWHERSSFVETPGTRVDGACQRH 242
           VW E  S   T G RV+G    H
Sbjct: 401 VWRETISSTATLGFRVEGIKLAH 423


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -3

Query: 310 VWHERSSFVETPGTRVDGACQRH 242
           VW E  S   T G RV+G    H
Sbjct: 316 VWRETISSTATLGFRVEGIKLAH 338


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -3

Query: 310 VWHERSSFVETPGTRVDGACQRH 242
           VW E  S   T G RV+G    H
Sbjct: 635 VWRETISSTATLGFRVEGIKLAH 657


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,860
Number of Sequences: 438
Number of extensions: 3231
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)